RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 FAM228AQ86W67 206 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 THNSL1Q8IYQ7 743 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 METTL13Q8N6R0 699 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 CRYGNQ8WXF5 182 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 EDAQ92838 391 aa14.09□□□□□ -0.15
CCDC57-208ENST00000475635 TYW1Q9NV66 732 aaKnown RBP14.09□□□□□ -0.15
CCDC57-208ENST00000475635 USP15Q9Y4E8 981 aaPredicted RBP14.09□□□□□ -0.15
CCDC57-208ENST00000475635 MAFBQ9Y5Q3 323 aaPredicted RBP14.09□□□□□ -0.15
CCDC57-208ENST00000475635 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 LOC730098B7Z3J9 87 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ADAMTS3O15072 1205 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 GPR32O75388 356 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 FGFR1P11362 822 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ADD1P35611 737 aaKnown RBP14.08□□□□□ -0.16
CCDC57-208ENST00000475635 MRE11P49959 708 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ERVFC1P60507 584 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 SETQ01105 290 aaPredicted RBP14.08□□□□□ -0.16
CCDC57-208ENST00000475635 KRT32Q14532 448 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ZNF746Q6NUN9 644 aaPredicted RBP14.08□□□□□ -0.16
CCDC57-208ENST00000475635 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 SMAP1Q8IYB5 467 aaPredicted RBP14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ZMYND12Q9H0C1 365 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 CWH43Q9H720 699 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 ATP6V0A4Q9HBG4 840 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 TBC1D22BQ9NU19 505 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 TMEM161AQ9NX61 479 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 TCEAL9Q9UHQ7 104 aa14.08□□□□□ -0.16
CCDC57-208ENST00000475635 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 ESYT2A0FGR8 921 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 PSAPP07602 524 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 HMGB1P09429 215 aaKnown RBP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 LAG3P18627 525 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 FAM189BP81408 668 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 FGD1P98174 961 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 DUSP6Q16828 381 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 REXO1Q8N1G1 1221 aaKnown RBP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 VN1R2Q8NFZ6 395 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 CDCA3Q99618 268 aaPredicted RBP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 ELAC1Q9H777 363 aaKnown RBP14.07□□□□□ -0.16
CCDC57-208ENST00000475635 C6orf50Q9HD87 102 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 GABBR1Q9UBS5 961 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 PCDHA10Q9Y5I2 948 aa14.07□□□□□ -0.16
CCDC57-208ENST00000475635 FSD2A1L4K1 749 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 TMEM221A6NGB7 291 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 M0R296 226 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 FSCN2O14926 492 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 MAGEB2O15479 319 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 CPA1P15085 419 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 CLCN3P51790 818 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 DSC3Q14574 896 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
CCDC57-208ENST00000475635 PRR16Q569H4 304 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 PLPP4Q5VZY2 271 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 MCTP2Q6DN12 878 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 PDE12Q6L8Q7 609 aaKnown RBP14.06□□□□□ -0.16
CCDC57-208ENST00000475635 TRIM67Q6ZTA4 783 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 CCDC12Q8WUD4 166 aaPredicted RBP14.06□□□□□ -0.16
CCDC57-208ENST00000475635 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 AKT3Q9Y243 479 aa14.06□□□□□ -0.16
CCDC57-208ENST00000475635 USP34Q70CQ2 3546 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
CCDC57-208ENST00000475635 GNA11P29992 359 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 NLRP11P59045 1033 aaKnown RBP14.05□□□□□ -0.16
CCDC57-208ENST00000475635 ZXDAP98168 799 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 PKN1Q16512 942 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 LRRC55Q6ZSA7 311 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 Q6ZUG5 572 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 BMP8AQ7Z5Y6 402 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 SUSD6Q92537 303 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 MRPS27Q92552 414 aaKnown RBP14.05□□□□□ -0.16
CCDC57-208ENST00000475635 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 FAM167AQ96KS9 214 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 MAP7D2Q96T17 732 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 TCF25Q9BQ70 676 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
CCDC57-208ENST00000475635 LZTS1Q9Y250 596 aa14.05□□□□□ -0.16
CCDC57-208ENST00000475635 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 HOXA2O43364 376 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
CCDC57-208ENST00000475635 CDC45O75419 566 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 SRGAP2BP0DMP2 458 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
CCDC57-208ENST00000475635 TMOD1P28289 359 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 CIITAP33076 1130 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 TECP42680 631 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 PLCB3Q01970 1234 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 TMEM184AQ6ZMB5 413 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 ABI1Q8IZP0 508 aa14.04□□□□□ -0.16
CCDC57-208ENST00000475635 LRRC43Q8N309 656 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms