RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 TFIP11Q9UBB9 837 aaKnown RBP17.55■□□□□ 0.4
CPSF3-203ENST00000475482 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 TRPV2Q9Y5S1 764 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 SPTBN5Q9NRC6 3674 aaKnown RBP17.54■□□□□ 0.4
CPSF3-203ENST00000475482 WDR64B1ANS9 1081 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 ENPP3O14638 875 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 ZNF862O60290 1169 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 TRAK2O60296 914 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 TDP2O95551 362 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 C22orf31O95567 290 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 YEATS4O95619 227 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 SFNP31947 248 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 UBE2HP62256 183 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 GRB10Q13322 594 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.4
CPSF3-203ENST00000475482 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 FAM43BQ6ZT52 329 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-203ENST00000475482 RDM1Q8NG50 284 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 COL25A1Q9BXS0 654 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-203ENST00000475482 SUGCTQ9HAC7 445 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 RC3H2Q9HBD1 1191 aaKnown RBP17.54■□□□□ 0.4
CPSF3-203ENST00000475482 PRDM6Q9NQX0 595 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 LMCD1Q9NZU5 365 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 NLRC5Q86WI3 1866 aa17.54■□□□□ 0.4
CPSF3-203ENST00000475482 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 CCDC194A0A1B0GVG4 234 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 GAS7O60861 476 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 BMP15O95972 392 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 STK38Q15208 465 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 INF2Q27J81 1249 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 RTN4RL1Q86UN2 441 aaPredicted RBP17.53■□□□□ 0.4
CPSF3-203ENST00000475482 LINC01465Q8N7H1 131 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
CPSF3-203ENST00000475482 LINC01599Q8WXQ3 324 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 GJA10Q969M2 543 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 TEKT3Q9BXF9 490 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 TCEAL9Q9UHQ7 104 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 RCOR1Q9UKL0 485 aa17.53■□□□□ 0.4
CPSF3-203ENST00000475482 CD52P31358 61 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.4
CPSF3-203ENST00000475482 JAK3P52333 1124 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 NR5A1Q13285 461 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 SF3A1Q15459 793 aaKnown RBP17.52■□□□□ 0.4
CPSF3-203ENST00000475482 KLHL40Q2TBA0 621 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 PPP4R3AQ6IN85 833 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 OXER1Q8TDS5 423 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 FAM167AQ96KS9 214 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 FTHL17Q9BXU8 183 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 GDPD2Q9HCC8 539 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 KCNMB3Q9NPA1 279 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 PADI3Q9ULW8 664 aa17.52■□□□□ 0.4
CPSF3-203ENST00000475482 M0QZ92 97 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 MAGEB2O15479 319 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 GTPBP6O43824 516 aaPredicted RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 SLC37A4O43826 429 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 STBD1O95210 358 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 LINC00271P0C7V0 271 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 CCDC85BQ15834 202 aaPredicted RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 UGCGQ16739 394 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 CKAP2LQ8IYA6 745 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 ATXN2LQ8WWM7 1075 aaKnown RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 PPM1EQ8WY54 764 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 ZNF689Q96CS4 500 aaPredicted RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 SAMD11Q96NU1 681 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
CPSF3-203ENST00000475482 SAMM50Q9Y512 469 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 MYO7AQ13402 2215 aa17.51■□□□□ 0.39
CPSF3-203ENST00000475482 UPP2O95045 317 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 OATP04181 439 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 GCFC2P16383 781 aaKnown RBP17.5■□□□□ 0.39
CPSF3-203ENST00000475482 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
CPSF3-203ENST00000475482 TARBP2Q15633 366 aaKnown RBP17.5■□□□□ 0.39
CPSF3-203ENST00000475482 EARS2Q5JPH6 523 aaKnown RBP17.5■□□□□ 0.39
CPSF3-203ENST00000475482 TMEM40Q8WWA1 233 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 CEP89Q96ST8 783 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 YME1L1Q96TA2 773 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 C17orf80Q9BSJ5 609 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
CPSF3-203ENST00000475482 TMX1Q9H3N1 280 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 CDHR5Q9HBB8 845 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 NRBP2Q9NSY0 501 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 THEGQ9P2T0 379 aa17.5■□□□□ 0.39
CPSF3-203ENST00000475482 TBX3O15119 743 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 SPTLC2O15270 562 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 GPR32O75388 356 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 DGKIO75912 1065 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 PRKCEQ02156 737 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 PPP2R5CQ13362 524 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms