RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PPP1R18Q6NYC8 613 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 TMTC3Q6ZXV5 915 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 LRRC43Q8N309 656 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 ZNF302Q9NR11 478 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 SORCS3Q9UPU3 1222 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 RBM8AQ9Y5S9 174 aaKnown RBP14.34□□□□□ -0.11
SKA3-206ENST00000475251 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 hCG_1984214I3L0E3 225 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SKA3-206ENST00000475251 ARP10275 920 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 RXRAP19793 462 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 NAPAP54920 295 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 FAM189BP81408 668 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
SKA3-206ENST00000475251 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
SKA3-206ENST00000475251 LLGL2Q6P1M3 1020 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 SYCE2Q6PIF2 218 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 NIPA1Q7RTP0 329 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 CCDC82Q8N4S0 544 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 ZNF713Q8N859 430 aaPredicted RBP14.33□□□□□ -0.12
SKA3-206ENST00000475251 CYP2W1Q8TAV3 490 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 TMEM40Q8WWA1 233 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 ZNF558Q96NG5 402 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 OSMRQ99650 979 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 CWH43Q9H720 699 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 CEP131Q9UPN4 1083 aa14.33□□□□□ -0.12
SKA3-206ENST00000475251 hCG_1642624A0A1W2PR95 340 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 CARNS1A5YM72 827 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 H0Y858 1186 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 MEIS1O00470 390 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 FGFR1P11362 822 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
SKA3-206ENST00000475251 ADCY7P51828 1080 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 APOBRQ0VD83 1088 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 KIZQ2M2Z5 673 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 KCNT2Q6UVM3 1135 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 ABHD15Q6UXT9 468 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 CKAP2LQ8IYA6 745 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 KREMEN2Q8NCW0 462 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
SKA3-206ENST00000475251 ADAM7Q9H2U9 754 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 CDHR5Q9HBB8 845 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
SKA3-206ENST00000475251 SPG21Q9NZD8 308 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 TCEAL9Q9UHQ7 104 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 USP34Q70CQ2 3546 aa14.32□□□□□ -0.12
SKA3-206ENST00000475251 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
SKA3-206ENST00000475251 TMOD1P28289 359 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 SREBF1P36956 1147 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 MTHFRP42898 656 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 CCDC60Q8IWA6 550 aaPredicted RBP14.31□□□□□ -0.12
SKA3-206ENST00000475251 METTL13Q8N6R0 699 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 RSPH1Q8WYR4 309 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 MAP7D2Q96T17 732 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 APOL5Q9BWW9 433 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
SKA3-206ENST00000475251 HIDE1A8MVS5 230 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 MAGEB2O15479 319 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 C22orf31O95567 290 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 CCNE2O96020 404 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 SP100P23497 879 aaPredicted RBP14.3□□□□□ -0.12
SKA3-206ENST00000475251 DSC3Q14574 896 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 SWSAP1Q6NVH7 229 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 SMAP1Q8IYB5 467 aaPredicted RBP14.3□□□□□ -0.12
SKA3-206ENST00000475251 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
SKA3-206ENST00000475251 TMEM87AQ8NBN3 555 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 MRPL9Q9BYD2 267 aaKnown RBP14.3□□□□□ -0.12
SKA3-206ENST00000475251 TBC1D22BQ9NU19 505 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 HCSTQ9UBK5 93 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 HCFC2Q9Y5Z7 792 aa14.3□□□□□ -0.12
SKA3-206ENST00000475251 SMCO2A6NFE2 343 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 IPO5O00410 1097 aaKnown RBP14.29□□□□□ -0.12
SKA3-206ENST00000475251 GPR32O75388 356 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 NBL1P41271 181 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 SETQ01105 290 aaPredicted RBP14.29□□□□□ -0.12
SKA3-206ENST00000475251 GIT2Q14161 759 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
SKA3-206ENST00000475251 PLA2G4DQ86XP0 818 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 TDRD5Q8NAT2 981 aaKnown RBP14.29□□□□□ -0.12
SKA3-206ENST00000475251 EXOC6Q8TAG9 804 aa14.29□□□□□ -0.12
SKA3-206ENST00000475251 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms