RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 METTL13Q8N6R0 699 aa17.73■□□□□ 0.43
SRRT-209ENST00000474896 COLGALT1Q8NBJ5 622 aa17.73■□□□□ 0.43
SRRT-209ENST00000474896 BBXQ8WY36 941 aaPredicted RBP17.73■□□□□ 0.43
SRRT-209ENST00000474896 OSMRQ99650 979 aa17.73■□□□□ 0.43
SRRT-209ENST00000474896 ZNF577Q9BSK1 485 aa17.73■□□□□ 0.43
SRRT-209ENST00000474896 ATP6V0A4Q9HBG4 840 aa17.73■□□□□ 0.43
SRRT-209ENST00000474896 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
SRRT-209ENST00000474896 ZNF318Q5VUA4 2279 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 TMEM221A6NGB7 291 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 M0R296 226 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 C22orf31O95567 290 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 VTNP04004 478 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 FGFR1P11362 822 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
SRRT-209ENST00000474896 ZXDAP98168 799 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 CBX2Q14781 532 aaPredicted RBP17.72■□□□□ 0.43
SRRT-209ENST00000474896 TSGA10IPQ3SY00 556 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 BMP8AQ7Z5Y6 402 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 FAM228AQ86W67 206 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 CRYGNQ8WXF5 182 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 PBXIP1Q96AQ6 731 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 RPGRIP1Q96KN7 1286 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 PHF7Q9BWX1 381 aaPredicted RBP17.72■□□□□ 0.43
SRRT-209ENST00000474896 CWH43Q9H720 699 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 TBC1D22BQ9NU19 505 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
SRRT-209ENST00000474896 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
SRRT-209ENST00000474896 DSC3Q14574 896 aa17.71■□□□□ 0.43
SRRT-209ENST00000474896 DUSP6Q16828 381 aa17.71■□□□□ 0.43
SRRT-209ENST00000474896 PFKFB3Q16875 520 aaPredicted RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 PDE12Q6L8Q7 609 aaKnown RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 ZNF746Q6NUN9 644 aaPredicted RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 CDCA3Q99618 268 aaPredicted RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 ELAC1Q9H777 363 aaKnown RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 PCDHA10Q9Y5I2 948 aa17.71■□□□□ 0.43
SRRT-209ENST00000474896 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
SRRT-209ENST00000474896 FSCN2O14926 492 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 PSAPP07602 524 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 APOBRQ0VD83 1088 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 GABBR1Q9UBS5 961 aa17.7■□□□□ 0.42
SRRT-209ENST00000474896 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
SRRT-209ENST00000474896 MAGEB2O15479 319 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 CDC45O75419 566 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
SRRT-209ENST00000474896 LAG3P18627 525 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 CLCN3P51790 818 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
SRRT-209ENST00000474896 FGD1P98174 961 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 PRR16Q569H4 304 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 IER5LQ5T953 404 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 PLPP4Q5VZY2 271 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 EFCAB12Q6NXP0 572 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 LRRC55Q6ZSA7 311 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
SRRT-209ENST00000474896 SUSD6Q92537 303 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 MRPS27Q92552 414 aaKnown RBP17.69■□□□□ 0.42
SRRT-209ENST00000474896 CASD1Q96PB1 797 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 TMEM117Q9H0C3 514 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 S1PR5Q9H228 398 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 AKT3Q9Y243 479 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
SRRT-209ENST00000474896 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 ESYT2A0FGR8 921 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 FSD2A1L4K1 749 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
SRRT-209ENST00000474896 TECP42680 631 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.42
SRRT-209ENST00000474896 RCAN1P53805 252 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
SRRT-209ENST00000474896 PLCB3Q01970 1234 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 KRT32Q14532 448 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 TMEM184AQ6ZMB5 413 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
SRRT-209ENST00000474896 TCF25Q9BQ70 676 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 ADAMTS10Q9H324 1103 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 TRIOO75962 3097 aa17.68■□□□□ 0.42
SRRT-209ENST00000474896 HOXA2O43364 376 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
SRRT-209ENST00000474896 CPA1P15085 419 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 TMOD1P28289 359 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 GNA11P29992 359 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 KCNC3Q14003 757 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 PKN1Q16512 942 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 ANKRD54Q6NXT1 300 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 LLGL2Q6P1M3 1020 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 KCNT2Q6UVM3 1135 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 SUGP1Q8IWZ8 645 aaKnown RBP17.67■□□□□ 0.42
SRRT-209ENST00000474896 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 PRSS33Q8NF86 280 aa17.67■□□□□ 0.42
SRRT-209ENST00000474896 CCDC12Q8WUD4 166 aaPredicted RBP17.67■□□□□ 0.42
SRRT-209ENST00000474896 ZNF668Q96K58 619 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms