RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SH2D3AQ9BRG2 576 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 LLPHQ9BRT6 129 aaKnown RBP20.17■□□□□ 0.82
UPF3A-203ENST00000474056 FTHL17Q9BXU8 183 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 TMX1Q9H3N1 280 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 SUGCTQ9HAC7 445 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 RC3H2Q9HBD1 1191 aaKnown RBP20.17■□□□□ 0.82
UPF3A-203ENST00000474056 ERVK-5Q9HDB9 667 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 SH2B1Q9NRF2 756 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-203ENST00000474056 AKT3Q9Y243 479 aa20.17■□□□□ 0.82
UPF3A-203ENST00000474056 MARCH6O60337 910 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 RPS6KA5O75582 802 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 PSMC5P62195 406 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 TBC1D8BQ0IIM8 1120 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 XKR3Q5GH77 459 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 NIFKQ9BYG3 293 aaKnown RBP20.16■□□□□ 0.82
UPF3A-203ENST00000474056 TSPYL2Q9H2G4 693 aaPredicted RBP20.16■□□□□ 0.82
UPF3A-203ENST00000474056 MYO7AQ13402 2215 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 BRWD1Q9NSI6 2320 aa20.16■□□□□ 0.82
UPF3A-203ENST00000474056 MGEA5O60502 916 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 TMOD1P28289 359 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 CRYBB1P53674 252 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-203ENST00000474056 SPIRE1Q08AE8 756 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 RABEP1Q15276 862 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 FAM228AQ86W67 206 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 C8orf76Q96K31 380 aa20.15■□□□□ 0.82
UPF3A-203ENST00000474056 ZNF668Q96K58 619 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-203ENST00000474056 A0A0C4DFX4 3053 aa20.14■□□□□ 0.82
UPF3A-203ENST00000474056 ADGRA3Q8IWK6 1321 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 NLRP11P59045 1033 aaKnown RBP20.14■□□□□ 0.81
UPF3A-203ENST00000474056 HMGN5P82970 282 aaKnown RBP20.14■□□□□ 0.81
UPF3A-203ENST00000474056 DRP2Q13474 957 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 PLA2G4FQ68DD2 849 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 NCAPH2Q6IBW4 605 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 ANO5Q75V66 913 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 FBXO22Q8NEZ5 403 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 ZNF689Q96CS4 500 aaPredicted RBP20.14■□□□□ 0.81
UPF3A-203ENST00000474056 WRAP73Q9P2S5 460 aaPredicted RBP20.14■□□□□ 0.81
UPF3A-203ENST00000474056 ST3GAL5Q9UNP4 418 aa20.14■□□□□ 0.81
UPF3A-203ENST00000474056 VCANP13611 3396 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 BAG4O95429 457 aaKnown RBP20.13■□□□□ 0.81
UPF3A-203ENST00000474056 P4HBP07237 508 aaKnown RBP20.13■□□□□ 0.81
UPF3A-203ENST00000474056 QARSP47897 775 aaKnown RBP20.13■□□□□ 0.81
UPF3A-203ENST00000474056 GPC3P51654 580 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 EPHA7Q15375 998 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 SLFN12Q8IYM2 578 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 CRIPAKQ8N1N5 446 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 ADAMTS10Q9H324 1103 aa20.13■□□□□ 0.81
UPF3A-203ENST00000474056 TCF20Q9UGU0 1960 aaKnown RBP20.12■□□□□ 0.81
UPF3A-203ENST00000474056 IGKV6-21A0A0C4DH24 114 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 DLL1O00548 723 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 GPR182O15218 404 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 NEMFO60524 1076 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 DGKIO75912 1065 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 LINC00271P0C7V0 271 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
UPF3A-203ENST00000474056 CALCRLQ16602 461 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 ODR4Q5SWX8 454 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 NPAS4Q8IUM7 802 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 TMEM192Q8IY95 271 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 FIBCD1Q8N539 461 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 DYDC2Q96IM9 177 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 SAMD11Q96NU1 681 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 LXNQ9BS40 222 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 RGL1Q9NZL6 768 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 THEGQ9P2T0 379 aa20.12■□□□□ 0.81
UPF3A-203ENST00000474056 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 IBSPP21815 317 aaPredicted RBP20.11■□□□□ 0.81
UPF3A-203ENST00000474056 NPEPPSP55786 919 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 FBXO18Q8NFZ0 1043 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 ADAM2Q99965 735 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
UPF3A-203ENST00000474056 LMCD1Q9NZU5 365 aa20.11■□□□□ 0.81
UPF3A-203ENST00000474056 DENND3A2RUS2 1198 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 ST18O60284 1047 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 DKC1O60832 514 aaKnown RBP eCLIP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 CD2BP2O95400 341 aaKnown RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 STAG3L1P0CL83 205 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 EIF4BP23588 611 aaKnown RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 SARSP49591 514 aaKnown RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 CYP4A11Q02928 519 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 BTG3Q14201 252 aaPredicted RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 CTTNQ14247 550 aaKnown RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 C4orf19Q8IY42 314 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 ZNF579Q8NAF0 562 aaKnown RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 SCLT1Q96NL6 688 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 COL25A1Q9BXS0 654 aaPredicted RBP20.1■□□□□ 0.81
UPF3A-203ENST00000474056 TMEM60Q9H2L4 133 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 CYP26B1Q9NR63 512 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 RGS18Q9NS28 235 aa20.1■□□□□ 0.81
UPF3A-203ENST00000474056 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
UPF3A-203ENST00000474056 CUL9Q8IWT3 2517 aa20.09■□□□□ 0.81
UPF3A-203ENST00000474056 C9IYK1 514 aa20.09■□□□□ 0.81
UPF3A-203ENST00000474056 FGFR4P22455 802 aa20.09■□□□□ 0.81
UPF3A-203ENST00000474056 TXKP42681 527 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms