RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GRAPLQ8TC17 118 aaPredicted RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 U2AF1L4Q8WU68 220 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 DDX47Q9H0S4 455 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 ZHX3Q9H4I2 956 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 INTS9Q9NV88 658 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 NENFQ9UMX5 172 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 KAT6BQ8WYB5 2073 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 O00370 1275 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 NDC80O14777 642 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 CLGNO14967 610 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MMEP08473 750 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 TNFAIP3P21580 790 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 DRD4P21917 467 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 ECHS1P30084 290 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 GBP2P32456 591 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 ZNF543Q08ER8 600 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 ITPK1Q13572 414 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 EPHA7Q15375 998 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 UAP1Q16222 522 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 SYDE1Q6ZW31 735 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 TRMT10CQ7L0Y3 403 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 CYFIP1Q7L576 1253 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MBOAT7Q96N66 472 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 TRIM7Q9C029 511 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 TMEM260Q9NX78 707 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 KCND2Q9NZV8 630 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 GCNT4Q9P109 453 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 PASKQ96RG2 1323 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 ZSCAN5CA6NGD5 496 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 USP17L5A8MUK1 530 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MGRN1O60291 552 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 PHF2O75151 1096 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 SUN1O94901 812 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 NR3C1P04150 777 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 RPA1P27694 616 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 JAM2P57087 298 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MRPS25P82663 173 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 CAV1Q03135 178 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 ALCAMQ13740 583 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 DCAF17Q5H9S7 520 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 KIAA1755Q5JYT7 1200 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 CEP57Q86XR8 500 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 CCT6BQ92526 530 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 GRAMD1AQ96CP6 724 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 EHMT1Q9H9B1 1298 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 GOPCQ9HD26 462 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 OLFML3Q9NRN5 406 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 AMACRQ9UHK6 382 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 SAP30BPQ9UHR5 308 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 FRMD4BQ9Y2L6 1034 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 POTEFA5A3E0 1075 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 P4HA2O15460 535 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 LUC7L3O95232 432 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 FGGP02679 453 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 POTEIP0CG38 1075 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 POTEJP0CG39 1038 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MMP13P45452 471 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 MMP14P50281 582 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 RNASE9P60153 205 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 CALCOCO2Q13137 446 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 SLC15A2Q16348 729 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 DUPD1Q68J44 220 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 POTEEQ6S8J3 1075 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 DCAF4Q8WV16 495 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 DYDC1Q8WWB3 177 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 SCLT1Q96NL6 688 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 SELENOSQ9BQE4 189 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 POLR3CQ9BUI4 534 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 AP1M1Q9BXS5 423 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 PACSIN1Q9BY11 444 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 KCNMB3Q9NPA1 279 aa6.63□□□□□ -1.35
HERC4-209ENST00000473533 PACSIN2Q9UNF0 486 aaPredicted RBP6.63□□□□□ -1.35
HERC4-209ENST00000473533 DDX60LQ5H9U9 1706 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 MYH7BA7E2Y1 1941 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 GAKO14976 1311 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 LOC102724159A0A0B4J2E5 919 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 TTI1O43156 1089 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 RPS6KA4O75676 772 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ATP5HO75947 161 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 HMGB2P26583 209 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 SLC12A3P55017 1021 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 MAP2K1Q02750 393 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 MAPK7Q13164 816 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 PWP2Q15269 919 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 Q4G0T1 1027 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 EPM2AIP1Q7L775 607 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 APLFQ8IW19 511 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 BBOF1Q8ND07 529 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 N4BP2L2Q92802 583 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 HAS1Q92839 578 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 COA7Q96BR5 231 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 RAB3IPQ96QF0 476 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms