RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, human

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCC1-208	ENST00000473062	STPG3	Q8N7X2	389 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	PRPF38A	Q8NAV1	312 aa	Known RBP	4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	LPP	Q93052	612 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	LCOR	Q96JN0	433 aa	Predicted RBP	4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	HIST1H2AH	Q96KK5	128 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	HIST1H2AJ	Q99878	128 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	PCGF6	Q9BYE7	350 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	ZMAT4	Q9H898	229 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	KCNK12	Q9HB15	430 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	VWA7	Q9Y334	891 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062	MRFAP1	Q9Y605	127 aa		4.63	□□□□□ -1.67
CLCC1-208	ENST00000473062		A0A0G2JNJ9	132 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	RASSF10	A6NK89	507 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	DVL2	O14641	736 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	PPM1G	O15355	546 aa	Predicted RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	TGM5	O43548	720 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	SASH1	O94885	1247 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	PRPF6	O94906	941 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	APOL3	O95236	402 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	KNG1	P01042	644 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	POLD1	P28340	1107 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	ETV4	P43268	484 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	MEOX1	P50221	254 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	EXOSC10	Q01780	885 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	SURF1	Q15526	300 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	ZMAT1	Q5H9K5	638 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	ERICH6B	Q5W0A0	696 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	FAM180A	Q6UWF9	173 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	FERMT3	Q86UX7	667 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	SIAH1	Q8IUQ4	282 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	GFM2	Q969S9	779 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	ZSWIM3	Q96MP5	696 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	PUS7	Q96PZ0	661 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	TACO1	Q9BSH4	297 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	IRF2BPL	Q9H1B7	796 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	LUC7L	Q9NQ29	371 aa	Known RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	SAE1	Q9UBE0	346 aa	Predicted RBP	4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062		Q9UFV3	132 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	ZBTB21	Q9ULJ3	1066 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	PLA2G2D	Q9UNK4	145 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	PHLDB1	Q86UU1	1377 aa		4.62	□□□□□ -1.67
CLCC1-208	ENST00000473062	H2AFY	O75367	372 aa	Known RBP	4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	MPIG6B	O95866	241 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	HMGCR	P04035	888 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	PLA2G1B	P04054	148 aa	Known RBP	4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	KRT1	P04264	644 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	MC4R	P32245	332 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	KCNC1	P48547	511 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	IL13RA1	P78552	427 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	SPIDR	Q14159	915 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	PRR31	Q5SQ13	230 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	FSTL4	Q6MZW2	842 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	CXorf67	Q86X51	503 aa	Predicted RBP	4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	GLB1L2	Q8IW92	636 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	RTKN2	Q8IZC4	609 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	CDYL2	Q8N8U2	506 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	CLRN3	Q8NCR9	226 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	RTF1	Q92541	710 aa	Known RBP	4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	NOX5	Q96PH1	765 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	CARD11	Q9BXL7	1154 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	POFUT1	Q9H488	388 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	USP40	Q9NVE5	1235 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	NUMBL	Q9Y6R0	609 aa		4.61	□□□□□ -1.67
CLCC1-208	ENST00000473062	DDX3X	O00571	662 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	DAPK3	O43293	454 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	FSBP	O95073	299 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	ENPP1	P22413	925 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	SLC5A3	P53794	718 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	KRT85	P78386	507 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	ITK	Q08881	620 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	KLF1	Q13351	362 aa	Predicted RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	USP10	Q14694	798 aa	Known RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	FSCN1	Q16658	493 aa	Known RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	VWA3B	Q502W6	1294 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	SYDE2	Q5VT97	1194 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	KANK2	Q63ZY3	851 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062		Q6ZUG5	572 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	KANSL1	Q7Z3B3	1105 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	RALYL	Q86SE5	291 aa	Known RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	OR5AN1	Q8NGI8	311 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	OR14C36	Q8NHC7	312 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	ADAMTS17	Q8TE56	1095 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	MTMR8	Q96EF0	704 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	YTHDC1	Q96MU7	727 aa	Known RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	MYL10	Q9BUA6	226 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	AMN	Q9BXJ7	453 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	MTG2	Q9H4K7	406 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	DENND2A	Q9ULE3	1009 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	PCDHB6	Q9Y5E3	794 aa		4.6	□□□□□ -1.67
CLCC1-208	ENST00000473062	MROH6	A6NGR9	719 aa		4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	GOLGA8A	A7E2F4	631 aa		4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	GOLGA8B	A8MQT2	603 aa		4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	HSP90B1	P14625	803 aa	Known RBP	4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	POU3F3	P20264	500 aa	Predicted RBP	4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	MRPS9	P82933	396 aa	Known RBP	4.59	□□□□□ -1.67
CLCC1-208	ENST00000473062	MEF2A	Q02078	507 aa	Predicted RBP	4.59	□□□□□ -1.67

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