RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 DHX16O60231 1041 aaKnown RBP6.79□□□□□ -1.32
SIK3-208ENST00000472648 GDF9O60383 454 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 RETP07949 1114 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 FGFR1P11362 822 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 NOVP48745 357 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 IGBP1P78318 339 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 SP4Q02446 784 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 CTDSPL2Q05D32 466 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 GIT2Q14161 759 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 PGM5Q15124 567 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 CSRP2Q16527 193 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 TMEM266Q2M3C6 531 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 ODR4Q5SWX8 454 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 GPATCH4Q5T3I0 446 aaKnown RBP6.79□□□□□ -1.32
SIK3-208ENST00000472648 CEP85Q6P2H3 762 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 TSSK4Q6SA08 328 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 C15orf39Q6ZRI6 1047 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 PRR23BQ6ZRT6 265 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 SLC24A5Q71RS6 500 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 PPFIBP1Q86W92 1011 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 KIF12Q96FN5 646 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 TMEM169Q96HH4 297 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 ADAM2Q99965 735 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 MYL10Q9BUA6 226 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 FAM126AQ9BYI3 521 aaPredicted RBP6.79□□□□□ -1.32
SIK3-208ENST00000472648 SLC2A4RGQ9NR83 387 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 TMEM161AQ9NX61 479 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 EPS15L1Q9UBC2 864 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.79□□□□□ -1.32
SIK3-208ENST00000472648 HELZ2Q9BYK8 2649 aaKnown RBP6.79□□□□□ -1.32
SIK3-208ENST00000472648 MBLAC1A4D2B0 266 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 C9IYK1 514 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 RNF113AO15541 343 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 MGEA5O60502 916 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 N4BP1O75113 896 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 ZFYP08048 801 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 MARK3P27448 753 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 METAP2P50579 478 aaKnown RBP eCLIP6.78□□□□□ -1.32
SIK3-208ENST00000472648 HSD17B4P51659 736 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 NRLP54845 237 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 PPP2R5DQ14738 602 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 AASDHQ4L235 1098 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 VSIG10LQ86VR7 867 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 ITPRIPQ8IWB1 547 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 FTSJ3Q8IY81 847 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 VPS52Q8N1B4 723 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 CELF5Q8N6W0 485 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 IL31RAQ8NI17 732 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 FEZF2Q8TBJ5 459 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 SLC22A17Q8WUG5 538 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 AUTS2Q8WXX7 1259 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 NELL1Q92832 810 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 ZFP91Q96JP5 570 aaPredicted RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 CELF4Q9BZC1 486 aaKnown RBP6.78□□□□□ -1.32
SIK3-208ENST00000472648 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 ZBP1Q9H171 429 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 CPVLQ9H3G5 476 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 RGS18Q9NS28 235 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 ERAP1Q9NZ08 941 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 PCDHA1Q9Y5I3 950 aa6.78□□□□□ -1.32
SIK3-208ENST00000472648 CLUHO75153 1309 aa6.77□□□□□ -1.32
SIK3-208ENST00000472648 ZNF316A6NFI3 1004 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 FAM170BA6NMN3 283 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 NCAM2O15394 837 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 ANP32CO43423 234 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 RPS6KA5O75582 802 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 GOLGA8HP0CJ92 632 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 SNHG28P0DPA3 235 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 TCF7P36402 384 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 ALDH7A1P49419 539 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 LIMK1P53667 647 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 KRT76Q01546 638 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 PRKCQQ04759 706 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 SNW1Q13573 536 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 MLF2Q15773 248 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 QRICH1Q2TAL8 776 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 RRP12Q5JTH9 1297 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 ZBTB41Q5SVQ8 909 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 MARCH8Q5T0T0 291 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 LRRC55Q6ZSA7 311 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 STOX1Q6ZVD7 989 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 TRMT2AQ8IZ69 625 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 ADGRF4Q8IZF3 695 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 SLC39A11Q8N1S5 342 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 KBTBD3Q8NAB2 608 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 BBXQ8WY36 941 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 OSBPL6Q9BZF3 934 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 UBA5Q9GZZ9 404 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 ELAC1Q9H777 363 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 PRMT8Q9NR22 394 aaPredicted RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 MAP3K20Q9NYL2 800 aaKnown RBP6.77□□□□□ -1.33
SIK3-208ENST00000472648 ANKFY1Q9P2R3 1169 aa6.77□□□□□ -1.33
SIK3-208ENST00000472648 GINS2Q9Y248 185 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms