RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 GPATCH4Q5T3I0 446 aaKnown RBP6.78□□□□□ -1.32
ITGB1-209ENST00000472147 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 EP400NLQ6ZTU2 488 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 FBXO11Q86XK2 927 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 MYOCDQ8IZQ8 938 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 FIBCD1Q8N539 461 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 PPP1R13LQ8WUF5 828 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 PPP2R3CQ969Q6 453 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 CHMP4CQ96CF2 233 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 RMDN3Q96TC7 470 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 C11orf84Q9BUA3 381 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-209ENST00000472147 PLVAPQ9BX97 442 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 PHACTR1Q9C0D0 580 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 CRISPLD1Q9H336 500 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 INCENPQ9NQS7 918 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 CLDND1Q9NY35 253 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 DMDP11532 3685 aa6.78□□□□□ -1.32
ITGB1-209ENST00000472147 ZDBF2Q9HCK1 2354 aa6.77□□□□□ -1.32
ITGB1-209ENST00000472147 MYO15AQ9UKN7 3530 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 STXBP3O00186 592 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 MBTPS2O43462 519 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 PDHBP11177 359 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 THPOP40225 353 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 ZNF543Q08ER8 600 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 DBN1Q16643 649 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 TCTN1Q2MV58 587 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 CELF3Q5SZQ8 465 aaKnown RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 ARHGEF16Q5VV41 709 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 SLC30A10Q6XR72 485 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 STOX1Q6ZVD7 989 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 CHST3Q7LGC8 479 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 VSIG10LQ86VR7 867 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 DGKHQ86XP1 1220 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 SUGP1Q8IWZ8 645 aaKnown RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 SYTL5Q8TDW5 730 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 NANOS1Q8WY41 292 aaKnown RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 ATP6V0A1Q93050 837 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 MYO19Q96H55 970 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 TAAR1Q96RJ0 339 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 ALG1Q9BT22 464 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 GPAMQ9HCL2 828 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 MRPL11Q9Y3B7 192 aaKnown RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 COL11A1P12107 1806 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-209ENST00000472147 FRYLO94915 3013 aa6.77□□□□□ -1.33
ITGB1-209ENST00000472147 ABCB11O95342 1321 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TTC41PQ6P2S7 1318 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TET1Q8NFU7 2136 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 C17orf102A2RUQ5 167 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TMEM221A6NGB7 291 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 H3BRB1 525 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 M0R296 226 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 ENPP3O14638 875 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SMARCA5O60264 1052 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 FGAP02671 866 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 ZXDAP98168 799 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 ZNF200P98182 395 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 HYAL1Q12794 435 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TRAF1Q13077 416 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SMAD4Q13485 552 aaKnown RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 UBAP2LQ14157 1087 aaKnown RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 CBX2Q14781 532 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 RPAINQ86UA6 219 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TRIM22Q8IYM9 498 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TBC1D5Q92609 795 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 ANKS1AQ92625 1134 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 P2RX5Q93086 422 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SPATA33Q96N06 139 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SEC62Q99442 399 aaKnown RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 C16orf70Q9BSU1 422 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 IFIH1Q9BYX4 1025 aaKnown RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 TUT1Q9H6E5 874 aaKnown RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 RUBCNLQ9H714 662 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SEPT3Q9UH03 358 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 MUTYHQ9UIF7 546 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 CD207Q9UJ71 328 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 MTMR7Q9Y216 660 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 GPC6Q9Y625 555 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-209ENST00000472147 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 CACNA1AO00555 2505 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 PARP14Q460N5 1801 aa6.76□□□□□ -1.33
ITGB1-209ENST00000472147 SCN10AQ9Y5Y9 1956 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 ZNF292O60281 2723 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-209ENST00000472147 A0A1W2PNR3 127 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 PROB1E7EW31 1015 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 GRM6O15303 877 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 BRD1O95696 1058 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 AVPR2P30518 371 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 HOXC8P31273 242 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 GHRHRQ02643 423 aa6.75□□□□□ -1.33
ITGB1-209ENST00000472147 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms