RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 DAGLBQ8NCG7 672 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 P2RX5Q93086 422 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 C1orf112Q9NSG2 853 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 PLAGL2Q9UPG8 496 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 AKT3Q9Y243 479 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 MYO7AQ13402 2215 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 CYP3A7-CYP3A51PA0A087WV96 503 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 PSMD10O75832 226 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 CSPG5O95196 566 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 MMP1P03956 469 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 CYP3A7P24462 503 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 TMOD1P28289 359 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 COL19A1Q14993 1142 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 NPY5RQ15761 445 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 UGCGQ16739 394 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 SLC24A5Q71RS6 500 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 LRRC71Q8N4P6 559 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 MAP7D2Q96T17 732 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 RNF216Q9NWF9 866 aaPredicted RBP25.43■■□□□ 1.66
C9orf3-213ENST00000471978 CLDND1Q9NY35 253 aa25.43■■□□□ 1.66
C9orf3-213ENST00000471978 NCK2O43639 380 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 CDKL5O76039 1030 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 NLRP11P59045 1033 aaKnown RBP25.42■■□□□ 1.66
C9orf3-213ENST00000471978 SCRN1Q12765 414 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 NONOQ15233 471 aaKnown RBP eCLIP25.42■■□□□ 1.66
C9orf3-213ENST00000471978 PUS10Q3MIT2 529 aaKnown RBP25.42■■□□□ 1.66
C9orf3-213ENST00000471978 NAALADL2Q58DX5 795 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 MIER3Q7Z3K6 550 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 LINC01465Q8N7H1 131 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 C1QTNF1Q9BXJ1 281 aa25.42■■□□□ 1.66
C9orf3-213ENST00000471978 GRXCR2A6NFK2 248 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 C9IYK1 514 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 IL9P15248 144 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 COL9A1P20849 921 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 KRT25Q7Z3Z0 450 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 KLHL23Q8NBE8 558 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 RDM1Q8NG50 284 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 SLKQ9H2G2 1235 aaPredicted RBP25.41■■□□□ 1.66
C9orf3-213ENST00000471978 KCNJ14Q9UNX9 436 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 WDR81Q562E7 1941 aa25.41■■□□□ 1.66
C9orf3-213ENST00000471978 ITGB1P05556 798 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 HYAL1Q12794 435 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 CAMK1Q14012 370 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 MOXD1Q6UVY6 613 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 FAM178BQ8IXR5 827 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 ZNF710Q8N1W2 664 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 SPPL3Q8TCT6 385 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 MBOAT7Q96N66 472 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 ADAMTS10Q9H324 1103 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 EPHX3Q9H6B9 360 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 CD320Q9NPF0 282 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 PPP4R2Q9NY27 417 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 KIAA1671Q9BY89 1806 aa25.4■■□□□ 1.66
C9orf3-213ENST00000471978 ATG2AQ2TAZ0 1938 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 TBKBP1A7MCY6 615 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 TBC1D8BQ0IIM8 1120 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 INF2Q27J81 1249 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 FAM102BQ5T8I3 360 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 ETNPPLQ8TBG4 499 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 DDX25Q9UHL0 483 aaKnown RBP25.39■■□□□ 1.66
C9orf3-213ENST00000471978 TPCN1Q9ULQ1 816 aa25.39■■□□□ 1.66
C9orf3-213ENST00000471978 PFKFB2O60825 505 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 EIF4BP23588 611 aaKnown RBP25.38■■□□□ 1.65
C9orf3-213ENST00000471978 DNAJB1P25685 340 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 FAM189BP81408 668 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 DSC3Q14574 896 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 CTC1Q2NKJ3 1217 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 SPOUT1Q5T280 376 aaKnown RBP25.38■■□□□ 1.65
C9orf3-213ENST00000471978 B3GNT9Q6UX72 402 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 ZNF668Q96K58 619 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-213ENST00000471978 PHF20Q9BVI0 1012 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 IGFLR1Q9H665 355 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 ATP6V0A4Q9HBG4 840 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 TMEM161AQ9NX61 479 aa25.38■■□□□ 1.65
C9orf3-213ENST00000471978 SEPT9Q9UHD8 586 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-213ENST00000471978 CCDC194A0A1B0GVG4 234 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 XBP1P17861 261 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 LTBRP36941 435 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 ANAPC15P60006 121 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 TARBP2Q15633 366 aaKnown RBP25.37■■□□□ 1.65
C9orf3-213ENST00000471978 LETM2Q2VYF4 491 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 XKR3Q5GH77 459 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 GJD3Q8N144 294 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 POF1BQ8WVV4 589 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 KHSRPQ92945 711 aaKnown RBP eCLIP25.37■■□□□ 1.652e-6■■■□□ 16
C9orf3-213ENST00000471978 SCLT1Q96NL6 688 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 NIFKQ9BYG3 293 aaKnown RBP25.37■■□□□ 1.65
C9orf3-213ENST00000471978 ELAC1Q9H777 363 aaKnown RBP25.37■■□□□ 1.65
C9orf3-213ENST00000471978 FAM50BQ9Y247 325 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 PCDHB12Q9Y5F1 795 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 STK36Q9NRP7 1315 aa25.37■■□□□ 1.65
C9orf3-213ENST00000471978 SLC37A4O43826 429 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 FGFR1P11362 822 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 ZSCAN20P17040 1043 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-213ENST00000471978 GTF2F1P35269 517 aaKnown RBP eCLIP25.36■■□□□ 1.651e-6■■■■□ 26.4
C9orf3-213ENST00000471978 GPC3P51654 580 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 MTERF2Q49AM1 385 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 PPP2R3CQ969Q6 453 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 AAASQ9NRG9 546 aa25.36■■□□□ 1.65
C9orf3-213ENST00000471978 TMEM150BA6NC51 233 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms