RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 OR10A2Q9H208 303 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 INSRRP14616 1297 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 EPHA7Q15375 998 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 LARP4Q71RC2 724 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC39-202ENST00000471307 TAX1BP1Q86VP1 789 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 RTKN2Q8IZC4 609 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 KIAA1958Q8N8K9 716 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 MAML3Q96JK9 1138 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 GNRHR2Q96P88 292 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 FANCLQ9NW38 375 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 CDC42EP3Q9UKI2 254 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 ZFR2Q9UPR6 939 aaKnown RBP8.12□□□□□ -1.11
CCDC39-202ENST00000471307 JAG2Q9Y219 1238 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 CD2APQ9Y5K6 639 aa8.12□□□□□ -1.11
CCDC39-202ENST00000471307 UBA6A0AVT1 1052 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-202ENST00000471307 PMS2P1A4D2B8 440 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 MRE11P49959 708 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 SESN2P58004 480 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-202ENST00000471307 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 TTC38Q5R3I4 469 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 FILIP1Q7Z7B0 1213 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 LPPQ93052 612 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 WWC2-AS2Q96NR7 200 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 KIAA1683Q9H0B3 1180 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
CCDC39-202ENST00000471307 PLAAQ9Y263 795 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 TESMINQ9Y4I5 508 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 SPO11Q9Y5K1 396 aa8.11□□□□□ -1.11
CCDC39-202ENST00000471307 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 CDC45O75419 566 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 RAD17O75943 681 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
CCDC39-202ENST00000471307 ADCY1Q08828 1119 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 FEZ1Q99689 392 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 SLC30A1Q9Y6M5 507 aa8.1□□□□□ -1.11
CCDC39-202ENST00000471307 MATN2O00339 956 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 FOXS1O43638 330 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 SLC6A3Q01959 620 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 PUM1Q14671 1186 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC39-202ENST00000471307 R3HDM1Q15032 1099 aaKnown RBP8.09□□□□□ -1.11
CCDC39-202ENST00000471307 CDSNQ15517 529 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 SLFN12LQ6IEE8 588 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 ZNF585AQ6P3V2 769 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 LRRTM3Q86VH5 581 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 CFHR4Q92496 578 aa8.09□□□□□ -1.11
CCDC39-202ENST00000471307 MUSKO15146 869 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 CDC14BO60729 498 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 GAS7O60861 476 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 F2P00734 622 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 BCAR1P56945 870 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 DUSP8Q13202 625 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 TBR1Q16650 682 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 POLNQ7Z5Q5 900 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 BCL6BQ8N143 479 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-202ENST00000471307 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 EDAQ92838 391 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 DPYSL5Q9BPU6 564 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 KCMF1Q9P0J7 381 aa8.08□□□□□ -1.12
CCDC39-202ENST00000471307 SAE1Q9UBE0 346 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-202ENST00000471307 MRPL42Q9Y6G3 142 aaKnown RBP8.08□□□□□ -1.12
CCDC39-202ENST00000471307 MAFGO15525 162 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 TNFRSF1AP19438 455 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 COMTP21964 271 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 STAT5BP51692 787 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 HGFACQ04756 655 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 DGKDQ16760 1214 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 CREB3L3Q68CJ9 461 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
CCDC39-202ENST00000471307 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 GFM2Q969S9 779 aaKnown RBP8.07□□□□□ -1.12
CCDC39-202ENST00000471307 ELF4Q99607 663 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-202ENST00000471307 C12orf65Q9H3J6 166 aaKnown RBP8.07□□□□□ -1.12
CCDC39-202ENST00000471307 NELFAQ9H3P2 528 aa8.07□□□□□ -1.12
CCDC39-202ENST00000471307 MATN3O15232 486 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 H2AFYO75367 372 aaKnown RBP8.06□□□□□ -1.12
CCDC39-202ENST00000471307 PTX3P26022 381 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-202ENST00000471307 RGS3P49796 1198 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 NEK4P51957 841 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 KIAA0907Q7Z7F0 614 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-202ENST00000471307 PHYKPLQ8IUZ5 450 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 AHI1Q8N157 1196 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 EFHBQ8N7U6 833 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 OR5AN1Q8NGI8 311 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 RPGRQ92834 1020 aaKnown RBP8.06□□□□□ -1.12
CCDC39-202ENST00000471307 TUBGCP5Q96RT8 1024 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 IFT57Q9NWB7 429 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 OXSMQ9NWU1 459 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-202ENST00000471307 MYO15BQ96JP2 1530 aa8.06□□□□□ -1.12
CCDC39-202ENST00000471307 FAM83GA6ND36 823 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 ENPP3O14638 875 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 KPNA6O60684 536 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 SLC9A1P19634 815 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms