RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DPYSL5Q9BPU6 564 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 FBXO10Q9UK96 956 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 TBX22Q9Y458 520 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 TGM5O43548 720 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 ZNF623O75123 536 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 F2P00734 622 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 APEX1P27695 318 aaKnown RBP7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 MRE11P49959 708 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 MYBPC3Q14896 1274 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 ACAP1Q15027 740 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 FUKQ8N0W3 1084 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 SCYL1Q96KG9 808 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 KLC2Q9H0B6 622 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 SEMA4AQ9H3S1 761 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 AGO3Q9H9G7 860 aaKnown RBP7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 ACSS2Q9NR19 701 aa7.36□□□□□ -1.23
PRPF40A-206ENST00000471167 ARHGAP6O43182 974 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 KPNA6O60684 536 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 ZXDCQ2QGD7 858 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 ZNF585AQ6P3V2 769 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 UBE2R2Q712K3 238 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 OTOP2Q7RTS6 562 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 GPR135Q8IZ08 494 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 DVL3Q92997 716 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 MAML3Q96JK9 1138 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 TARS2Q9BW92 718 aaKnown RBP7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 CABP5Q9NP86 173 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 OAZ3Q9UMX2 235 aa7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 ZFR2Q9UPR6 939 aaKnown RBP7.35□□□□□ -1.23
PRPF40A-206ENST00000471167 PLSCR1O15162 318 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 CR2P20023 1033 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 ZMAT1Q5H9K5 638 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 UNQ6494/PRO21346Q6UXR6 183 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 DBX2Q6ZNG2 339 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 CHTF18Q8WVB6 975 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 NKD2Q969F2 451 aaPredicted RBP7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 MYRFQ9Y2G1 1151 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 NR2E1Q9Y466 385 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 SPO11Q9Y5K1 396 aa7.34□□□□□ -1.23
PRPF40A-206ENST00000471167 A0A087X0B3 334 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 H7C1D1 291 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 MATN3O15232 486 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CDC45O75419 566 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 APPP05067 770 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CYP17A1P05093 508 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 RAC3P60763 192 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 ADAM8P78325 824 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 SAFB2Q14151 953 aaKnown RBP eCLIP7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 PUM1Q14671 1186 aaKnown RBP eCLIP7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 EPHA7Q15375 998 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CNNM4Q6P4Q7 775 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 USP30Q70CQ3 517 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 KANSL1Q7Z3B3 1105 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 KIF18BQ86Y91 864 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 NIM1KQ8IY84 436 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 IFNL2Q8IZJ0 200 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CHST13Q8NET6 341 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CALML6Q8TD86 181 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 GPR20Q99678 358 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 HAPLN2Q9GZV7 340 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 OR10A2Q9H208 303 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 MS4A5Q9H3V2 200 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 TSC22D4Q9Y3Q8 395 aa7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 CTDP1Q9Y5B0 961 aaPredicted RBP7.33□□□□□ -1.24
PRPF40A-206ENST00000471167 LCHNA4D1U4 455 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 C2orf78A6NCI8 922 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 STAT3P40763 770 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 SMAD3P84022 425 aaKnown RBP7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 ADAM15Q13444 863 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 OR14K1Q8NGZ2 314 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 RTF1Q92541 710 aaKnown RBP7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 FEZ1Q99689 392 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
PRPF40A-206ENST00000471167 UBA6A0AVT1 1052 aaPredicted RBP7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 GSG1L2A8MUP6 293 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 ELL2O00472 640 aaPredicted RBP7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 ENPP3O14638 875 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 FLT3P36888 993 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 SLFN12LQ6IEE8 588 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 SMC1BQ8NDV3 1235 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 OR5AN1Q8NGI8 311 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 PCIF1Q9H4Z3 704 aa7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 HECAQ9UBI9 543 aaPredicted RBP7.31□□□□□ -1.24
PRPF40A-206ENST00000471167 A0A0A6YYK5 440 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 RAD17O75943 681 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 NEK4P51957 841 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 TTC38Q5R3I4 469 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 GIMAP8Q8ND71 665 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 SOX7Q9BT81 388 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 TOMM22Q9NS69 142 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 THG1LQ9NWX6 298 aaKnown RBP7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 SLC30A1Q9Y6M5 507 aa7.3□□□□□ -1.24
PRPF40A-206ENST00000471167 CDC14BO60729 498 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms