RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 IQCDQ96DY2 449 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 DUSP9Q99956 384 aaKnown RBP17.94■□□□□ 0.46
HOXB3-205ENST00000470495 MMTAG2Q9BU76 263 aaKnown RBP17.94■□□□□ 0.46
HOXB3-205ENST00000470495 PCIF1Q9H4Z3 704 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 XKR9Q5GH70 373 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 TRIM58Q8NG06 486 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 WDR11Q9BZH6 1224 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 CD248Q9HCU0 757 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 TMOD4Q9NZQ9 345 aa17.94■□□□□ 0.46
HOXB3-205ENST00000470495 FBXO9Q9UK97 447 aaPredicted RBP17.94■□□□□ 0.46
HOXB3-205ENST00000470495 SPP2Q13103 211 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 TRIM65Q6PJ69 517 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 CCDC170Q8IYT3 715 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 NACC1Q96RE7 527 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 REEP2Q9BRK0 252 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 PARVGQ9HBI0 331 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 RABL2AQ9UBK7 228 aaPredicted RBP17.93■□□□□ 0.46
HOXB3-205ENST00000470495 PCDHA13Q9Y5I0 950 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 SMAPO00193 183 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 NLRX1Q86UT6 975 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 CCDC50Q8IVM0 306 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 ADAMTS1Q9UHI8 967 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 TMEM110-MUSTN1A8MSY1 372 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 FAN1Q9Y2M0 1017 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 AFPP02771 609 aaKnown RBP17.93■□□□□ 0.46
HOXB3-205ENST00000470495 ARHGAP25P42331 645 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 GJA8P48165 433 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
HOXB3-205ENST00000470495 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 FAM186BQ8IYM0 893 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 AGBL1Q96MI9 1066 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 DNAJC18Q9H819 358 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 VCPKMTQ9H867 229 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 MLXIPQ9HAP2 919 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 MYO1AQ9UBC5 1043 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 FAM184BQ9ULE4 1060 aa17.93■□□□□ 0.46
HOXB3-205ENST00000470495 MSH4O15457 936 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 TADA3O75528 432 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 PSMC6P62333 389 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 MRPS25P82663 173 aaKnown RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 FAM76AQ8TAV0 307 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 IFT81Q8WYA0 676 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 HAS1Q92839 578 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 LARSQ9P2J5 1176 aaKnown RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 IPO5O00410 1097 aaKnown RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 PLEKP08567 350 aaPredicted RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 TMED1Q13445 227 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 CYP11B2P19099 503 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 NMT1P30419 496 aaKnown RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 ABL2P42684 1182 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
HOXB3-205ENST00000470495 CEP55Q53EZ4 464 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 CCDC80Q76M96 950 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 LMNTD2Q8IXW0 634 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 ITM2BQ9Y287 266 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 ZNF711Q9Y462 761 aa17.92■□□□□ 0.46
HOXB3-205ENST00000470495 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
HOXB3-205ENST00000470495 ABCB4P21439 1286 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 CCNHP51946 323 aaPredicted RBP17.91■□□□□ 0.46
HOXB3-205ENST00000470495 CUL3Q13618 768 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 KNOP1Q1ED39 458 aaKnown RBP17.91■□□□□ 0.46
HOXB3-205ENST00000470495 SAMD7Q7Z3H4 446 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 U2AF1L4Q8WU68 220 aaKnown RBP17.91■□□□□ 0.46
HOXB3-205ENST00000470495 L2HGDHQ9H9P8 463 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 VAV2P52735 878 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 MAP3K9P80192 1104 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 DCAF15Q66K64 600 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 SH3BP5LQ7L8J4 393 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 METTL14Q9HCE5 456 aaKnown RBP17.91■□□□□ 0.46
HOXB3-205ENST00000470495 MYBP10242 640 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 PRELPP51888 382 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 CCDC127Q96BQ5 260 aa17.91■□□□□ 0.46
HOXB3-205ENST00000470495 FAM86B1E9PN63 330 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 RNF225M0QZC1 329 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 FAM86B2P0C5J1 330 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 SLC8A1P32418 973 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 GKAP1Q5VSY0 366 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 KSR1Q8IVT5 923 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 USP6NLQ92738 828 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 A0A1W2PRG0 241 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 M0R2N6 131 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 NR3C1P04150 777 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 SMTNP53814 917 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 PHC3Q8NDX5 983 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 TMA7Q9Y2S6 64 aaKnown RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 FAM169AQ9Y6X4 670 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms