RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 TRIM29Q14134 588 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
HLA-C-206ENST00000470363 TMEM40Q8WWA1 233 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 NSUN3Q9H649 340 aaKnown RBP13.04□□□□□ -0.32
HLA-C-206ENST00000470363 MGEA5O60502 916 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 DNAJB1P25685 340 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 CTNNB1P35222 781 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 KRT76Q01546 638 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 RESTQ13127 1097 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 PTCRAQ6ISU1 281 aaPredicted RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 TBC1D22BQ9NU19 505 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
HLA-C-206ENST00000470363 COL1A2P08123 1366 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 TRIOO75962 3097 aa13.03□□□□□ -0.32
HLA-C-206ENST00000470363 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 DDX39AO00148 427 aaKnown RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 GPR37L1O60883 481 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 GPR32O75388 356 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 C22orf31O95567 290 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 MMP1P03956 469 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 ZNF76P36508 570 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 NLRP5P59047 1200 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 FAM189BP81408 668 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 HYAL1Q12794 435 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
HLA-C-206ENST00000470363 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 P2RX5Q93086 422 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 ZNF577Q9BSK1 485 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 ZNF302Q9NR11 478 aa13.02□□□□□ -0.33
HLA-C-206ENST00000470363 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 C9IYK1 514 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 M0QZ92 97 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 M0R2N6 131 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 BACH1O14867 736 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 NCK2O43639 380 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 ITGB1P05556 798 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 XBP1P17861 261 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 GNA11P29992 359 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 GATMP50440 423 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 PAK2Q13177 524 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 NPY5RQ15761 445 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 GJD3Q8N144 294 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 ALG13Q9NP73 1137 aaKnown RBP13.01□□□□□ -0.33
HLA-C-206ENST00000470363 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 RGS18Q9NS28 235 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 RALGAPA2Q2PPJ7 1873 aa13.01□□□□□ -0.33
HLA-C-206ENST00000470363 ZNF862O60290 1169 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
HLA-C-206ENST00000470363 USP11P51784 963 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
HLA-C-206ENST00000470363 NR5A1Q13285 461 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 ADAM15Q13444 863 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 DSC3Q14574 896 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-C-206ENST00000470363 PRR16Q569H4 304 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 B3GNT9Q6UX72 402 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 ST3GAL5Q9UNP4 418 aa13□□□□□ -0.33
HLA-C-206ENST00000470363 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
HLA-C-206ENST00000470363 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
HLA-C-206ENST00000470363 MSH4O15457 936 aa12.99□□□□□ -0.33
HLA-C-206ENST00000470363 RPS6KA5O75582 802 aa12.99□□□□□ -0.33
HLA-C-206ENST00000470363 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms