RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 CAND2O75155 1236 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 GDF11O95390 407 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 STXBP5LQ9Y2K9 1186 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 CBWD3Q5JTY5 395 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 CBWD5Q5RIA9 395 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 FRMD5Q7Z6J6 570 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 LENG9Q96B70 501 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 OPLAHO14841 1288 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 FSBPO95073 299 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 SLCO1A2P46721 670 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 PLTPP55058 493 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 IFFO1Q0D2I5 559 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 CUL1Q13616 776 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 BYSLQ13895 437 aaKnown RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 CDC42EP5Q6NZY7 148 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 ALG3Q92685 438 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 CABS1Q96KC9 395 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 ACP6Q9NPH0 428 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 COG5Q9UP83 839 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 WNK3Q9BYP7 1800 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 TISP43B9A030 160 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 JAM2P57087 298 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 DRAP1Q14919 205 aaPredicted RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 ATP8B4Q8TF62 1192 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
VARS2-205ENST00000469358 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
VARS2-205ENST00000469358 F8VZ95 297 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 MSH4O15457 936 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SYT2Q8N9I0 419 aaPredicted RBP13.13□□□□□ -0.31
VARS2-205ENST00000469358 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 CCDC114Q96M63 670 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 TBCAO75347 108 aaKnown RBP13.13□□□□□ -0.31
VARS2-205ENST00000469358 SERPINB2P05120 415 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 NT5C2P49902 561 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 CCDC121Q6ZUS5 278 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 KRT35Q92764 455 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 C18orf8Q96DM3 657 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 SH2D3AQ9BRG2 576 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 VCPKMTQ9H867 229 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 GGT7Q9UJ14 662 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 AMFRQ9UKV5 643 aa13.13□□□□□ -0.31
VARS2-205ENST00000469358 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 CALUO43852 315 aaPredicted RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 KRT13P13646 458 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 IFI35P80217 286 aaPredicted RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 SLFN11Q7Z7L1 901 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 FAM186BQ8IYM0 893 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 SELENOSQ9BQE4 189 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 NENFQ9UMX5 172 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 PDXKO00764 312 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 DDX3YO15523 660 aaKnown RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 RPA1P27694 616 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 PRKCIP41743 596 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 STAT1P42224 750 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 JAG1P78504 1218 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 FOXR2Q6PJQ5 311 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms