RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 EVPLQ92817 2033 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 VTNP04004 478 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 FGFR1P11362 822 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 RCAN1P53805 252 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 DSC3Q14574 896 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-207ENST00000469093 DUSP6Q16828 381 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-207ENST00000469093 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 BMP8AQ7Z5Y6 402 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 SKAP1Q86WV1 359 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 METTL13Q8N6R0 699 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 CWH43Q9H720 699 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 ELAC1Q9H777 363 aaKnown RBP13.9□□□□□ -0.18
COL5A1-207ENST00000469093 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 PCDHA10Q9Y5I2 948 aa13.9□□□□□ -0.18
COL5A1-207ENST00000469093 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 FSCN2O14926 492 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 MRE11P49959 708 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 KRT32Q14532 448 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 PKN1Q16512 942 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
COL5A1-207ENST00000469093 TMEM184AQ6ZMB5 413 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 SUSD6Q92537 303 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-207ENST00000469093 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-207ENST00000469093 NAP1L2Q9ULW6 460 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-207ENST00000469093 ZDBF2Q9HCK1 2354 aa13.89□□□□□ -0.19
COL5A1-207ENST00000469093 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 MAGEB2O15479 319 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 PSAPP07602 524 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 HMGB1P09429 215 aaKnown RBP13.88□□□□□ -0.19
COL5A1-207ENST00000469093 CPA1P15085 419 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 CIITAP33076 1130 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 NLRP11P59045 1033 aaKnown RBP13.88□□□□□ -0.19
COL5A1-207ENST00000469093 ZXDAP98168 799 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 PLCB3Q01970 1234 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 KCNC3Q14003 757 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 PRR16Q569H4 304 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 EFCAB12Q6NXP0 572 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 SMAP1Q8IYB5 467 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-207ENST00000469093 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 CASD1Q96PB1 797 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 S1PR5Q9H228 398 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 ADAMTS10Q9H324 1103 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 GABBR1Q9UBS5 961 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
COL5A1-207ENST00000469093 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 TMEM221A6NGB7 291 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 M0R296 226 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 PRPF3O43395 683 aaKnown RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 EDIL3O43854 480 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 LAG3P18627 525 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 CLCN3P51790 818 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 FGD1P98174 961 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 SETQ01105 290 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 IER5LQ5T953 404 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 REXO1Q8N1G1 1221 aaKnown RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 LENG9Q96B70 501 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 TMEM117Q9H0C3 514 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 LZTS1Q9Y250 596 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 TRIOO75962 3097 aa13.87□□□□□ -0.19
COL5A1-207ENST00000469093 FNDC1Q4ZHG4 1894 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-207ENST00000469093 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 ZNF862O60290 1169 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 GNA11P29992 359 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 KCNT2Q6UVM3 1135 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 Q6ZUG5 572 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 CCDC12Q8WUD4 166 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-207ENST00000469093 KCNB2Q92953 911 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 TCF25Q9BQ70 676 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 AKT3Q9Y243 479 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 SAMM50Q9Y512 469 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 PLXNA4Q9HCM2 1894 aa13.86□□□□□ -0.19
COL5A1-207ENST00000469093 FSD2A1L4K1 749 aa13.85□□□□□ -0.19
COL5A1-207ENST00000469093 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
COL5A1-207ENST00000469093 HOXA2O43364 376 aa13.85□□□□□ -0.19
COL5A1-207ENST00000469093 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-207ENST00000469093 TMOD1P28289 359 aa13.85□□□□□ -0.19
COL5A1-207ENST00000469093 TECP42680 631 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms