RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
COL27A1-203ENST00000468565 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 AGO3Q9H9G7 860 aaKnown RBP16.25■□□□□ 0.19
COL27A1-203ENST00000468565 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 XKR3Q5GH77 459 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-203ENST00000468565 SPOCK2Q92563 424 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 HAS1Q92839 578 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
COL27A1-203ENST00000468565 CD52P31358 61 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 SAFBQ15424 915 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL27A1-203ENST00000468565 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
COL27A1-203ENST00000468565 SLFN12Q8IYM2 578 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 LINC01465Q8N7H1 131 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 NIFKQ9BYG3 293 aaKnown RBP16.23■□□□□ 0.19
COL27A1-203ENST00000468565 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 TRANK1O15050 2925 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 LINC01553A4QN01 128 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 FOSBP53539 338 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 PSMC5P62195 406 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 PAK2Q13177 524 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
COL27A1-203ENST00000468565 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 PADI3Q9ULW8 664 aa16.23■□□□□ 0.19
COL27A1-203ENST00000468565 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-203ENST00000468565 EML1O00423 815 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 ENPP3O14638 875 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 MARCH6O60337 910 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL27A1-203ENST00000468565 STBD1O95210 358 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 POU3F3P20264 500 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-203ENST00000468565 TMOD1P28289 359 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 ODR4Q5SWX8 454 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 EFCAB12Q6NXP0 572 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 METTL13Q8N6R0 699 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 TGS1Q96RS0 853 aaKnown RBP16.22■□□□□ 0.19
COL27A1-203ENST00000468565 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 CERS4Q9HA82 394 aa16.22■□□□□ 0.19
COL27A1-203ENST00000468565 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-203ENST00000468565 PRRC2BQ5JSZ5 2229 aaKnown RBP16.22■□□□□ 0.19
COL27A1-203ENST00000468565 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-203ENST00000468565 ERVK-21P61565 698 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 BANK1Q8NDB2 785 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 YME1L1Q96TA2 773 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 EPOPA6NHQ4 379 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 GPR32O75388 356 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 PRPF40AO75400 957 aaKnown RBP16.21■□□□□ 0.19
COL27A1-203ENST00000468565 UPP2O95045 317 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 IGFBP4P22692 258 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
COL27A1-203ENST00000468565 CLCN3P51790 818 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-203ENST00000468565 SPIRE1Q08AE8 756 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 TBC1D8BQ0IIM8 1120 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 EPHA7Q15375 998 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 FBXO18Q8NFZ0 1043 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 LINC01599Q8WXQ3 324 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-203ENST00000468565 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
COL27A1-203ENST00000468565 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.18
COL27A1-203ENST00000468565 RPS6KA5O75582 802 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 VTNP04004 478 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 GUCY1B3Q02153 619 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 CALCRLQ16602 461 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 SPRED2Q7Z698 418 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 TMEM40Q8WWA1 233 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 SAMD11Q96NU1 681 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 CEP89Q96ST8 783 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 ERVK-5Q9HDB9 667 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 KIAA1671Q9BY89 1806 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 FNDC1Q4ZHG4 1894 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-203ENST00000468565 UNC80Q8N2C7 3258 aa16.2■□□□□ 0.18
COL27A1-203ENST00000468565 RFXAPO00287 272 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 NEMFO60524 1076 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 MTERF2Q49AM1 385 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-203ENST00000468565 RTN4RL1Q86UN2 441 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-203ENST00000468565 LRRC71Q8N4P6 559 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-203ENST00000468565 OSMRQ99650 979 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 AKT3Q9Y243 479 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 GPR182O15218 404 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 GTPBP6O43824 516 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-203ENST00000468565 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms