RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 DDX20Q9UHI6 824 aaKnown RBP6.64□□□□□ -1.35
USP39-213ENST00000467885 GRIN2DO15399 1336 aa6.64□□□□□ -1.35
USP39-213ENST00000467885 PLXNB2O15031 1838 aa6.64□□□□□ -1.35
USP39-213ENST00000467885 MYH7BA7E2Y1 1941 aa6.64□□□□□ -1.35
USP39-213ENST00000467885 DOCK3Q8IZD9 2030 aa6.64□□□□□ -1.35
USP39-213ENST00000467885 IGKV6-21A0A0C4DH24 114 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 PVALEFA0A1B0GWK0 134 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 NOP56O00567 594 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 BACH1O14867 736 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 GTPBP6O43824 516 aaPredicted RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 HBP1O60381 514 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 KPNA6O60684 536 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 DKC1O60832 514 aaKnown RBP eCLIP6.63□□□□□ -1.35
USP39-213ENST00000467885 KINO60870 393 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 MAFO75444 373 aaPredicted RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 LETM1O95202 739 aaPredicted RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 LGALS2P05162 132 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 INSRRP14616 1297 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 TXLNAP40222 546 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 SLC26A2P50443 739 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 ADAM17P78536 824 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 PURAQ00577 322 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 AMPD3Q01432 767 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 EHHADHQ08426 723 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 POSTNQ15063 836 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 FSCN1Q16658 493 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 XKR9Q5GH70 373 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 MARCH8Q5T0T0 291 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 CCDC183Q5T5S1 534 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 FAM160B1Q5W0V3 765 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 FBXO46Q6PJ61 603 aaPredicted RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 PADI6Q6TGC4 694 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 TRMT1LQ7Z2T5 733 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 TLK2Q86UE8 772 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 CKAP2LQ8IYA6 745 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 CEP57L1Q8IYX8 460 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 DAW1Q8N136 415 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 ATP8B4Q8TF62 1192 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 DDX12PQ92771 950 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 GLG1Q92896 1179 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 ATP6V0A1Q93050 837 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 CDK5RAP3Q96JB5 506 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 GSDMAQ96QA5 445 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 NTPCRQ9BSD7 190 aaKnown RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 FUCA2Q9BTY2 467 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 RUSC1Q9BVN2 902 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 UNC93B1Q9H1C4 597 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 NUP62CLQ9H1M0 184 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 TNMDQ9H2S6 317 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 AZI2Q9H6S1 392 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 PAK6Q9NQU5 681 aaPredicted RBP6.63□□□□□ -1.35
USP39-213ENST00000467885 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 CYP26B1Q9NR63 512 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 ERAP1Q9NZ08 941 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 KDM3AQ9Y4C1 1321 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
USP39-213ENST00000467885 LCTP09848 1927 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 TCHHQ07283 1943 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 EMSYQ7Z589 1322 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 SYNRGQ9UMZ2 1314 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 IGSF9BQ9UPX0 1349 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 F2P00734 622 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 OATP04181 439 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 MYL1P05976 194 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 MYL3P08590 195 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 RARBP10826 455 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 CCL5P13501 91 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 GUCY2CP25092 1073 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 KLRC1P26715 233 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 CST5P28325 142 aaPredicted RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 ARL2P36404 184 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 CPT1AP50416 773 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 MAPK7Q13164 816 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 MORC3Q14149 939 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 KCNB1Q14721 858 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 LRRC41Q15345 812 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 ZNF484Q5JVG2 852 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 PLA2G4FQ68DD2 849 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 ISM2Q6H9L7 571 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 Q6ZNB5 142 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 NYAP1Q6ZVC0 841 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 DYMQ7RTS9 669 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 GPBP1Q86WP2 473 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 ARMC5Q96C12 935 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 ZFRQ96KR1 1074 aaKnown RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 CEP170P1Q96L14 293 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 MED15Q96RN5 788 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 FIZ1Q96SL8 496 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 LRRC27Q9C0I9 530 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 GZF1Q9H116 711 aaPredicted RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 DHX33Q9H6R0 707 aaKnown RBP6.62□□□□□ -1.35
USP39-213ENST00000467885 MAGEF1Q9HAY2 307 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 XPNPEP1Q9NQW7 623 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 SETD4Q9NVD3 440 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms