RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
VCP-204ENST00000466100 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
VCP-204ENST00000466100 NPHP3-ACAD11A0A0J9YXS1 232 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 RRN3P2A6NIE6 340 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 USO1O60763 962 aaKnown RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 DGAT1O75907 488 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
VCP-204ENST00000466100 DPYDQ12882 1025 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 CUL4BQ13620 913 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 EMC2Q15006 297 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 POSTNQ15063 836 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 KANK3Q6NY19 840 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 SPATA20Q8TB22 786 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 DDX12PQ92771 950 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 ZBTB10Q96DT7 871 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
VCP-204ENST00000466100 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 SETD4Q9NVD3 440 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 TANC1Q9C0D5 1861 aa12.39□□□□□ -0.43
VCP-204ENST00000466100 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
VCP-204ENST00000466100 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 KLRC4O43908 158 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 TRAK2O60296 914 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 MYL1P05976 194 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 KLRC1P26715 233 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 AFMP43652 599 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 CDK7P50613 346 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 ZNF131P52739 623 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 IGBP1P78318 339 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
VCP-204ENST00000466100 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
VCP-204ENST00000466100 TBC1D8BQ0IIM8 1120 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 PNOCQ13519 176 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 GIT2Q14161 759 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 SNX17Q15036 470 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
VCP-204ENST00000466100 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 TIPINQ9BVW5 301 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 BLZF1Q9H2G9 400 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
VCP-204ENST00000466100 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
VCP-204ENST00000466100 RSPH10B2B2RC85 870 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 ARVCFO00192 962 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 MAGEB2O15479 319 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 TREHO43280 583 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
VCP-204ENST00000466100 HIP1RO75146 1068 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 RSPH10BP0C881 870 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 ARL2P36404 184 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
VCP-204ENST00000466100 SOX10P56693 466 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 AMPD3Q01432 767 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
VCP-204ENST00000466100 EHHADHQ08426 723 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 DRP2Q13474 957 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 SLC7A3Q8WY07 619 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 SEZ6LQ9BYH1 1024 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
VCP-204ENST00000466100 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
VCP-204ENST00000466100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 GNAT1P11488 350 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 EN2P19622 333 aaPredicted RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 CLCN3P51790 818 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 RTP1P59025 263 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 CAMK4Q16566 473 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 SERINC5Q86VE9 423 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 WNT8BQ93098 351 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms