RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TRIM39Q9HCM9 518 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 PMS2P1A4D2B8 440 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 ZBTB48P10074 688 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-208ENST00000464001 STAT5BP51692 787 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 ALDH6A1Q02252 535 aaKnown RBP6.27□□□□□ -1.41
ITGB1-208ENST00000464001 MIIPQ5JXC2 388 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 OR14K1Q8NGZ2 314 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 EXTL1Q92935 676 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 PLA2G3Q9NZ20 509 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 VWA7Q9Y334 891 aa6.27□□□□□ -1.41
ITGB1-208ENST00000464001 SLC26A4O43511 780 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 SLPIP03973 132 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 SESN2P58004 480 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-208ENST00000464001 HHEXQ03014 270 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 FOXL1Q12952 345 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 GRM7Q14831 915 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 FNDC3BQ53EP0 1204 aaKnown RBP6.26□□□□□ -1.41
ITGB1-208ENST00000464001 ADGRE4PQ86SQ3 457 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 LPPQ93052 612 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 FOXB1Q99853 325 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 CSRNP2Q9H175 543 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 OSBPL2Q9H1P3 480 aa6.26□□□□□ -1.41
ITGB1-208ENST00000464001 M0R2C6 588 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 H2AFYO75367 372 aaKnown RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 KRT37O76014 449 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 RAPGEF3O95398 923 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 MSX2P35548 267 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 IGFALSP35858 605 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 FNTBP49356 437 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 HGFACQ04756 655 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 ZCCHC8Q6NZY4 707 aaKnown RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 RTN4RL1Q86UN2 441 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 C1orf210Q8IVY1 113 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 SHCBP1Q8NEM2 672 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 PCED1AQ9H1Q7 454 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 ACSS2Q9NR19 701 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 SAMD15Q9P1V8 674 aa6.25□□□□□ -1.41
ITGB1-208ENST00000464001 SAE1Q9UBE0 346 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-208ENST00000464001 NPIPB8E9PQR5 432 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 ASLP04424 464 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 HIBADHP31937 336 aaKnown RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 MECP2P51608 486 aaKnown RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 KIF11P52732 1056 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 ROM1Q03395 351 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 KLHDC10Q6PID8 442 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 SGMS1Q86VZ5 419 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 GPR135Q8IZ08 494 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 CHST14Q8NCH0 376 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 FOXRED1Q96CU9 486 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 CABP5Q9NP86 173 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
ITGB1-208ENST00000464001 AURKAIP1Q9NWT8 199 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 CDK11AQ9UQ88 783 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-208ENST00000464001 PLSCR1O15162 318 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 SUV39H1O43463 412 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 OPA1O60313 960 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 ACRV1P26436 265 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 SLC6A3Q01959 620 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 PTH1RQ03431 593 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 ADAM15Q13444 863 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 D2HGDHQ8N465 521 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 RABGGTAQ92696 567 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
ITGB1-208ENST00000464001 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
ITGB1-208ENST00000464001 CTDP1Q9Y5B0 961 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-208ENST00000464001 GLRX3O76003 335 aaKnown RBP6.22□□□□□ -1.41
ITGB1-208ENST00000464001 CYP17A1P05093 508 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 FLT3P36888 993 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 ZNF174Q15697 407 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 LSM12Q3MHD2 195 aaKnown RBP6.22□□□□□ -1.41
ITGB1-208ENST00000464001 BCL6BQ8N143 479 aaPredicted RBP6.22□□□□□ -1.41
ITGB1-208ENST00000464001 THEMISQ8N1K5 641 aaPredicted RBP6.22□□□□□ -1.41
ITGB1-208ENST00000464001 MRFAP1L1Q96HT8 127 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 MPHOSPH9Q99550 1183 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 PCIF1Q9H4Z3 704 aa6.22□□□□□ -1.41
ITGB1-208ENST00000464001 UBA6A0AVT1 1052 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 H7C1D1 291 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 CYP27B1O15528 508 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 PRLP01236 227 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 RGS3P49796 1198 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 ABHD18Q0P651 414 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 KLF10Q13118 480 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 RIN1Q13671 783 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 BMS1Q14692 1282 aaKnown RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 DGKDQ16760 1214 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 TTC38Q5R3I4 469 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 UBE2R2Q712K3 238 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 NME9Q86XW9 330 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 SREK1Q8WXA9 508 aaKnown RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 GCDHQ92947 438 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 SLC7A6OSQ96CW6 309 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms