RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 USO1O60763 962 aaKnown RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 YWHABP31946 246 aaKnown RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 KCNA1Q09470 495 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 TSR1Q2NL82 804 aaKnown RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 ZC2HC1CQ53FD0 456 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 ODR4Q5SWX8 454 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 SYT10Q6XYQ8 523 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 TRIM59Q8IWR1 403 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 C4orf19Q8IY42 314 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 DAW1Q8N136 415 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 SHCBP1Q8NEM2 672 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 KIF18AQ8NI77 898 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 SENP7Q9BQF6 1050 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 EFCC1Q9HA90 598 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 JPH1Q9HDC5 661 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 AGPAT5Q9NUQ2 364 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 ZMYM2Q9UBW7 1377 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 PLXNB2O15031 1838 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 A0A1W2PQJ5 194 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 TMEM150BA6NC51 233 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 BACH1O14867 736 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 NR3C1P04150 777 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 FAM193AP78312 1265 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 ZBED6P86452 979 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 FIGNQ5HY92 759 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 SEPT14Q6ZU15 432 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 MAEAQ7L5Y9 396 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 GPRC5AQ8NFJ5 357 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 IQCDQ96DY2 449 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 FGD4Q96M96 766 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 PTPN18Q99952 460 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 DDX41Q9UJV9 622 aaKnown RBP15.92■□□□□ 0.14
HDAC6-213ENST00000462730 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-213ENST00000462730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDAC6-213ENST00000462730 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
HDAC6-213ENST00000462730 DNAJC25-GNG10A0A024R161 153 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 SORBS3O60504 671 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 TUBB4AP04350 444 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ICAM3P32942 547 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ZNF720Q7Z2F6 126 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 KSR1Q8IVT5 923 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 FAM207AQ9NSI2 230 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 PCDHA10Q9Y5I2 948 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 CLIC2O15247 247 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 RPL13P26373 211 aaKnown RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ETF1P62495 437 aaKnown RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 CCNA1P78396 465 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 SP2Q02086 613 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 SP4Q02446 784 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 PLA2G4FQ68DD2 849 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 TRIM65Q6PJ69 517 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 TRMT1LQ7Z2T5 733 aaKnown RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 CCDC155Q8N6L0 562 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ACRBPQ8NEB7 543 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ZNF397Q8NF99 534 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 PARK7Q99497 189 aaKnown RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 CHP1Q99653 195 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 SH2D3AQ9BRG2 576 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 FAM184BQ9ULE4 1060 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 TELO2Q9Y4R8 837 aa15.91■□□□□ 0.14
HDAC6-213ENST00000462730 ZNFX1Q9P2E3 1918 aaKnown RBP15.91■□□□□ 0.14
HDAC6-213ENST00000462730 MYH11P35749 1972 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 K7ENM7 598 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 EPHB6O15197 1021 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 TGFB1I1O43294 461 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 GCLCP48506 637 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-213ENST00000462730 XKR9Q5GH70 373 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 WDR59Q6PJI9 974 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 FRMD5Q7Z6J6 570 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 IKZF4Q9H2S9 585 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 ANKEF1Q9NU02 776 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 ZNHIT6Q9NWK9 470 aaKnown RBP15.9■□□□□ 0.14
HDAC6-213ENST00000462730 GABBR1Q9UBS5 961 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 PCDHB13Q9Y5F0 798 aa15.9■□□□□ 0.14
HDAC6-213ENST00000462730 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 PSAPP07602 524 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 ZNF157P51786 506 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 MEA1Q16626 185 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 NEK11Q8NG66 645 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 MPHOSPH6Q99547 160 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 MORF4L1Q9UBU8 362 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 DNAI1Q9UI46 699 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 AKAP3O75969 853 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 NPEPPSP55786 919 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 ACTR2P61160 394 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 GABPB1Q06547 395 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 KCNMA1Q12791 1236 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 CYFIP1Q7L576 1253 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms