RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MMTAG2Q9BU76 263 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DBR1Q9UK59 544 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KIAA1024Q9UPX6 916 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TANC1Q9C0D5 1861 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CTSHP09668 335 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CDC25AP30304 524 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TXLNAP40222 546 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CLCN3P51790 818 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MRPS6P82932 125 aaKnown RBP13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CDC42EP1Q00587 391 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 GRIN1Q05586 938 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CABP7Q86V35 215 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KIAA0319LQ8IZA0 1049 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CALML4Q96GE6 196 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CSRNP2Q9H175 543 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SUGCTQ9HAC7 445 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DDX19AQ9NUU7 478 aaKnown RBP13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DNM3Q9UQ16 869 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 AKT3Q9Y243 479 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZBTB39O15060 712 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CXCL10P02778 98 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MGAT3Q09327 533 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 EMC2Q15006 297 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ECM1Q16610 540 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 LRRC71Q8N4P6 559 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RASSF8Q8NHQ8 419 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MTRQ99707 1265 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PRO3102Q9H379 93 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CDY2AQ9Y6F7 541 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SQORQ9Y6N5 450 aa12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TRIP12Q14669 1992 aaPredicted RBP12.99□□□□□ -0.33
TRAF3IP1-204ENST00000462122 A0A1W2PPC1 479 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CUTAO60888 179 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 EYA4O95677 639 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CHRNA1P02708 482 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ACTN1P12814 892 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MBTPS1Q14703 1052 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FAM43BQ6ZT52 329 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DEFB128Q7Z7B8 93 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 USP38Q8NB14 1042 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MCPH1Q8NEM0 835 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CCDC39Q9UFE4 941 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
TRAF3IP1-204ENST00000462122 E9PMD0 336 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 NBNO60934 754 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FGBP02675 491 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 VTNP04004 478 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ME1P48163 572 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 EPHB4P54760 987 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 GRB10Q13322 594 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 GPNMBQ14956 572 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KIZQ2M2Z5 673 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FBXO47Q5MNV8 452 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CNKSR3Q6P9H4 555 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZNF410Q86VK4 478 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PSPC1Q8WXF1 523 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 APBB2Q92870 758 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SPATA32Q96LK8 384 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PNMA5Q96PV4 448 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.336e-6■■□□□ 11.7
TRAF3IP1-204ENST00000462122 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 XPNPEP1Q9NQW7 623 aa12.97□□□□□ -0.33
TRAF3IP1-204ENST00000462122 LAMA3Q16787 3333 aa12.96□□□□□ -0.33
TRAF3IP1-204ENST00000462122 A0A087WWV3 80 aa12.96□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ASAP2O43150 1006 aa12.96□□□□□ -0.33
TRAF3IP1-204ENST00000462122 EFCAB14O75071 495 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms