RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SHBGP04278 402 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 IBSPP21815 317 aaPredicted RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 KCNA1Q09470 495 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 PREPLQ4J6C6 727 aaPredicted RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 GKAP1Q5VSY0 366 aaPredicted RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 PARP9Q8IXQ6 854 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 ZNF831Q5JPB2 1677 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 ATP8B3O60423 1300 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 CALUO43852 315 aaPredicted RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 UFL1O94874 794 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 CCDC172P0C7W6 258 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 PRPF4BQ13523 1007 aaKnown RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 EPB41L4BQ9H329 900 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 ERVK-5Q9HDB9 667 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 GAKO14976 1311 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 PDXKO00764 312 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 OPLAHO14841 1288 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 DDX3YO15523 660 aaKnown RBP20.04■□□□□ 0.8
HPS3-204ENST00000462030 EVI5O60447 810 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 RPS6KA4O75676 772 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 ANXA13P27216 316 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 NPEPPSP55786 919 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 SPIRE1Q08AE8 756 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 SNCBQ16143 134 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 GLYCTKQ8IVS8 523 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 SLC35G2Q8TBE7 412 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 CCT6BQ92526 530 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 XPO6Q96QU8 1125 aaKnown RBP20.04■□□□□ 0.8
HPS3-204ENST00000462030 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 IKZF4Q9H2S9 585 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 INTUQ9ULD6 942 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 PCDHB13Q9Y5F0 798 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 ABCB4P21439 1286 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 LACTB2Q53H82 288 aaPredicted RBP20.04■□□□□ 0.8
HPS3-204ENST00000462030 ERMARDQ5T6L9 678 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 ARMC9Q7Z3E5 817 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 SGSM3Q96HU1 749 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 SWAP70Q9UH65 585 aa20.04■□□□□ 0.8
HPS3-204ENST00000462030 TPX2Q9ULW0 747 aaKnown RBP20.04■□□□□ 0.8
HPS3-204ENST00000462030 SF3A3Q12874 501 aaKnown RBP eCLIP20.03■□□□□ 0.8
HPS3-204ENST00000462030 C15orf52Q6ZUT6 534 aaKnown RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 SLC30A5Q8TAD4 765 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 HVCN1Q96D96 273 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 FAM163AQ96GL9 167 aaPredicted RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 FAM129AQ9BZQ8 928 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 ZDHHC18Q9NUE0 388 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 TYW1Q9NV66 732 aaKnown RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 MCM8Q9UJA3 840 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 SPDYE3A6NKU9 549 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 CTNND1O60716 968 aaKnown RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 SPATA31C1P0DKV0 1188 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 FERP16591 822 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 PTENP60484 403 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 ZNF211Q13398 564 aaPredicted RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 SYT2Q8N9I0 419 aaPredicted RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 GLG1Q92896 1179 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 CHMP6Q96FZ7 201 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 TTC7AQ9ULT0 858 aaPredicted RBP20.03■□□□□ 0.8
HPS3-204ENST00000462030 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
HPS3-204ENST00000462030 SLURP2P0DP57 97 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 IL1R1P14778 569 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 DR1Q01658 176 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 DUPD1Q68J44 220 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 NAP1L4Q99733 375 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 RAB17Q9H0T7 212 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 CNOT10Q9H9A5 744 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 DDX4Q9NQI0 724 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 NCANO14594 1321 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 GCNT3O95395 438 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 CHN1P15882 459 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 EIF3BP55884 814 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 PPATQ06203 517 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 PRR16Q569H4 304 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 WLSQ5T9L3 541 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 CEP57Q86XR8 500 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 RFFLQ8WZ73 363 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 ARHGEF26Q96DR7 871 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 SCLT1Q96NL6 688 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 METTL14Q9HCE5 456 aaKnown RBP20.02■□□□□ 0.8
HPS3-204ENST00000462030 DNM3Q9UQ16 869 aa20.02■□□□□ 0.8
HPS3-204ENST00000462030 SPATA31A5Q5VU36 1347 aa20.02■□□□□ 0.79
HPS3-204ENST00000462030 SPATA31A7Q8IWB4 1347 aa20.02■□□□□ 0.79
HPS3-204ENST00000462030 STAT1P42224 750 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 XRCC4Q13426 336 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 NEDD9Q14511 834 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 QRICH1Q2TAL8 776 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 UBAP2Q5T6F2 1119 aaKnown RBP20.01■□□□□ 0.79
HPS3-204ENST00000462030 SLC16A3O15427 465 aaKnown RBP20.01■□□□□ 0.79
HPS3-204ENST00000462030 CYP4A11Q02928 519 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 PLS1Q14651 629 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
HPS3-204ENST00000462030 SLFN12Q8IYM2 578 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
HPS3-204ENST00000462030 MBOAT7Q96N66 472 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 SELENOSQ9BQE4 189 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 ERP44Q9BS26 406 aa20.01■□□□□ 0.79
HPS3-204ENST00000462030 RUSC1Q9BVN2 902 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms