RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ZNF483Q8TF39 744 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 TMEM176AQ96HP8 235 aa5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 OR10A5Q9H207 317 aa5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 PARPBPQ9NWS1 579 aa5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 NDOR1Q9UHB4 597 aa5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
SPTLC1-203ENST00000461132 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 WNT9AO14904 365 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 EFCAB14O75071 495 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 MC4RP32245 332 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 JAM2P57087 298 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 CD83Q01151 205 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 LARP4Q71RC2 724 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 SHCBP1Q8NEM2 672 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 PCDH19Q8TAB3 1148 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 CBLCQ9ULV8 474 aa5.1□□□□□ -1.59
SPTLC1-203ENST00000461132 CADPSQ9ULU8 1353 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 MATN2O00339 956 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 SCDO00767 359 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 KCNK3O14649 394 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 SLC26A4O43511 780 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 HIP1RO75146 1068 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 C4BPAP04003 597 aaKnown RBP5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 AMY2AP04746 511 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 AMY2BP19961 511 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 MOGSQ13724 837 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 STILQ15468 1287 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 TBR1Q16650 682 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 IGFL4Q6B9Z1 124 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 ZNF662Q6ZS27 426 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 CACTINQ8WUQ7 758 aaKnown RBP5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 IKZF4Q9H2S9 585 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 MMRN2Q9H8L6 949 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 PCDHA9Q9Y5H5 950 aa5.09□□□□□ -1.59
SPTLC1-203ENST00000461132 A0A1W2PRX2 142 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 ARVCFO00192 962 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 CLSTN1O94985 981 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 CRTAMO95727 393 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 C6orf222P0C671 652 aaPredicted RBP5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 STAT5BP51692 787 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 DUSP8Q13202 625 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 TMEM200BQ69YZ2 307 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 TRIM68Q6AZZ1 485 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 ANKRD35Q8N283 1001 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 CISD2Q8N5K1 135 aaKnown RBP5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 JMYQ8N9B5 988 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 SH3TC2Q8TF17 1288 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 MAGEB10Q96LZ2 347 aaPredicted RBP5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 SFMBT1Q9UHJ3 866 aa5.08□□□□□ -1.6
SPTLC1-203ENST00000461132 PRAMEF22A3QJZ6 481 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 ZNF561-AS1K7EIQ3 104 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 FOXP2O15409 715 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 MMEP08473 750 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 SESN2P58004 480 aaPredicted RBP5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 GIMAP6Q6P9H5 292 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 LRSAM1Q6UWE0 723 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 MRGPRGQ86SM5 289 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 DNAJC10Q8IXB1 793 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 CFHR4Q92496 578 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 LPPQ93052 612 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 ZG16BQ96DA0 208 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 GBP4Q96PP9 640 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 MPHOSPH9Q99550 1183 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 MRPL4Q9BYD3 311 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 PIF1Q9H611 641 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 SLC52A2Q9HAB3 445 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 KCNH7Q9NS40 1196 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 BTBD7Q9P203 1132 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 ASB1Q9Y576 335 aa5.07□□□□□ -1.6
SPTLC1-203ENST00000461132 GOLGA8BA8MQT2 603 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 PLSCR1O15162 318 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 RAMP2O60895 175 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 H2AFYO75367 372 aaKnown RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 APEX1P27695 318 aaKnown RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 LACTBP83111 547 aaPredicted RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 TMEM132BQ14DG7 1078 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 GSPT2Q8IYD1 628 aaKnown RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 ASB15Q8WXK1 588 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 CLIP3Q96DZ5 547 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 CRAMP1Q96RY5 1269 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 PRRX2Q99811 253 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 POLR3GLQ9BT43 218 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 AMNQ9BXJ7 453 aa5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 ZNF703Q9H7S9 590 aaPredicted RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 NCOA5Q9HCD5 579 aaKnown RBP5.06□□□□□ -1.6
SPTLC1-203ENST00000461132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 PMS2P1A4D2B8 440 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 PLD2O14939 933 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 RASGRP1O95267 797 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 RAPGEF3O95398 923 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 ADAM15Q13444 863 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 SQSTM1Q13501 440 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 RIN1Q13671 783 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 KANK2Q63ZY3 851 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 BRAPQ7Z569 592 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 HOMER1Q86YM7 354 aa5.05□□□□□ -1.6
SPTLC1-203ENST00000461132 TMPRSS6Q8IU80 811 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms