RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 LMBR1Q8WVP7 490 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 DDX12PQ92771 950 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 REEP2Q9BRK0 252 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 TIPINQ9BVW5 301 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 TRIM9Q9C026 710 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
CDHR4-203ENST00000460430 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
CDHR4-203ENST00000460430 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 GAS2O43903 313 aaKnown RBP11.87□□□□□ -0.51
CDHR4-203ENST00000460430 HIP1RO75146 1068 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 MAFO75444 373 aaPredicted RBP11.87□□□□□ -0.51
CDHR4-203ENST00000460430 FAM13AO94988 1023 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 C22orf31O95567 290 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
CDHR4-203ENST00000460430 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
CDHR4-203ENST00000460430 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 CCDC65Q8IXS2 484 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 C7orf25Q9BPX7 421 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 NOD1Q9Y239 953 aa11.87□□□□□ -0.51
CDHR4-203ENST00000460430 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 MAGEB2O15479 319 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
CDHR4-203ENST00000460430 TMOD1P28289 359 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 DNM2P50570 870 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 DPYDQ12882 1025 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 TCP11Q8WWU5 503 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 ERCC4Q92889 916 aaPredicted RBP11.86□□□□□ -0.51
CDHR4-203ENST00000460430 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 POLR3FQ9H1D9 316 aaPredicted RBP11.86□□□□□ -0.51
CDHR4-203ENST00000460430 DHX33Q9H6R0 707 aaKnown RBP11.86□□□□□ -0.51
CDHR4-203ENST00000460430 GTF2IRD1Q9UHL9 959 aa11.86□□□□□ -0.51
CDHR4-203ENST00000460430 SCN10AQ9Y5Y9 1956 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 CYP2C9P11712 490 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 CAPN2P17655 700 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 GAP43P17677 238 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 KLRC1P26715 233 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 CLCN3P51790 818 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 SOX10P56693 466 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PTPN11Q06124 597 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 COASYQ13057 564 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 DMP1Q13316 513 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 GIT2Q14161 759 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 CNNM4Q6P4Q7 775 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 UNC13DQ70J99 1090 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 SESTD1Q86VW0 696 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 MYCT1Q8N699 235 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 ZBTB10Q96DT7 871 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 IFT74Q96LB3 600 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 SEZ6LQ9BYH1 1024 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 FAM49AQ9H0Q0 323 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 GZF1Q9H116 711 aaPredicted RBP11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PARVGQ9HBI0 331 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 GPRC5CQ9NQ84 441 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PANK4Q9NVE7 773 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 AKT3Q9Y243 479 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PCDHA5Q9Y5H7 936 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 COL4A3BPQ9Y5P4 624 aa11.85□□□□□ -0.51
CDHR4-203ENST00000460430 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 RSPH10B2B2RC85 870 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 RSPH10BP0C881 870 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
CDHR4-203ENST00000460430 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 ZSCAN23Q3MJ62 389 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 HERC4Q5GLZ8 1057 aaPredicted RBP11.84□□□□□ -0.51
CDHR4-203ENST00000460430 IER5Q5VY09 327 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
CDHR4-203ENST00000460430 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
CDHR4-203ENST00000460430 SFR1Q86XK3 245 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms