RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, human

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYN3-205	ENST00000459990	CIITA	P33076	1130 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	HSPA4	P34932	840 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	ZNF76	P36508	570 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	PBX3	P40426	434 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	ERVFC1	P60507	584 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	SET	Q01105	290 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	COASY	Q13057	564 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	PRR16	Q569H4	304 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	ZNF484	Q5JVG2	852 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	MIS18BP1	Q6P0N0	1132 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	REXO1	Q8N1G1	1221 aa	Known RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	LRRC71	Q8N4P6	559 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	COLGALT1	Q8NBJ5	622 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	BBX	Q8WY36	941 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	JAKMIP1	Q96N16	626 aa	Known RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	AGXT2	Q9BYV1	514 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	GABBR1	Q9UBS5	961 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	CDH22	Q9UJ99	828 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	FAM50B	Q9Y247	325 aa		11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	USP15	Q9Y4E8	981 aa	Predicted RBP	11.13	□□□□□ -0.63
SYN3-205	ENST00000459990	MYO15A	Q9UKN7	3530 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	DENND3	A2RUS2	1198 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	TMEM150B	A6NC51	233 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	MSH4	O15457	936 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	FGF18	O76093	207 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	ATF7	P17544	494 aa	Predicted RBP	11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	FGFR4	P22455	802 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	CRYBB1	P53674	252 aa	Predicted RBP	11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	PRKCE	Q02156	737 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	DRP2	Q13474	957 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	KCNC3	Q14003	757 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	KRT32	Q14532	448 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	DUSP6	Q16828	381 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	SLC24A5	Q71RS6	500 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	CKAP2L	Q8IYA6	745 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	TNPO1	Q92973	898 aa	Known RBP	11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	FBXL18	Q96ME1	805 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	CASD1	Q96PB1	797 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	GLT8D2	Q9H1C3	349 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	ADAMTS10	Q9H324	1103 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	NCOA5	Q9HCD5	579 aa	Known RBP	11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	TLR9	Q9NR96	1032 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	C1orf112	Q9NSG2	853 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	TYW1	Q9NV66	732 aa	Known RBP	11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	VPS54	Q9P1Q0	977 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	LRFN2	Q9ULH4	789 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	PCDHB7	Q9Y5E2	793 aa		11.12	□□□□□ -0.63
SYN3-205	ENST00000459990	C2orf16	Q68DN1	1984 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	LOC730098	B7Z3J9	87 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	GPR182	O15218	404 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	PRPF3	O43395	683 aa	Known RBP	11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	RPS6KB1	P23443	525 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	NLRP11	P59045	1033 aa	Known RBP	11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	FAM189B	P81408	668 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	NHLH1	Q02575	133 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	NPY5R	Q15761	445 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	CLLU1OS	Q5K130	101 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	PLPP4	Q5VZY2	271 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	METTL13	Q8N6R0	699 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	SUSD6	Q92537	303 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	CEP89	Q96ST8	783 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	POP1	Q99575	1024 aa	Known RBP	11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	TBC1D22B	Q9NU19	505 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	TMEM161A	Q9NX61	479 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	PCDHA10	Q9Y5I2	948 aa		11.11	□□□□□ -0.63
SYN3-205	ENST00000459990	HIDE1	A8MVS5	230 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	WDR64	B1ANS9	1081 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990		M0R2N6	131 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	CHMP2A	O43633	222 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	CSDE1	O75534	798 aa	Known RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	STBD1	O95210	358 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	OAT	P04181	439 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	PSAP	P07602	524 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	HMGB1	P09429	215 aa	Known RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	GPC3	P51654	580 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	UBE3A	Q05086	875 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	TOB2	Q14106	344 aa	Predicted RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	CBX2	Q14781	532 aa	Predicted RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	CSPP1	Q1MSJ5	1256 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	SPOUT1	Q5T280	376 aa	Known RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	EFCAB12	Q6NXP0	572 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	BLOC1S2	Q6QNY1	142 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	B3GNT9	Q6UX72	402 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	ALYREF	Q86V81	257 aa	Known RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	THNSL1	Q8IYQ7	743 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	FBXL16	Q8N461	479 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	FEZF2	Q8TBJ5	459 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	AIFM3	Q96NN9	605 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	PHOX2B	Q99453	314 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	SH2D3A	Q9BRG2	576 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	SLC26A6	Q9BXS9	759 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	RNF26	Q9BY78	433 aa	Predicted RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	UNC45A	Q9H3U1	944 aa		11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	ELAC1	Q9H777	363 aa	Known RBP	11.1	□□□□□ -0.63
SYN3-205	ENST00000459990	C6orf50	Q9HD87	102 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms