RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 FAM107AO95990 144 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PAEPP09466 180 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 H2AFZP0C0S5 128 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 NR2F2P24468 414 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PON1P27169 355 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 INPP5BP32019 993 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 CXCR5P32302 372 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 LSP1P33241 339 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 SHMT1P34896 483 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 SREBF1P36956 1147 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 MDH1P40925 334 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 STAT1P42224 750 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 CCT5P48643 541 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 CDR1P51861 262 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PTK2Q05397 1052 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 CXCL9Q07325 125 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ITGB3BPQ13352 177 aaPredicted RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP2R5AQ15172 486 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PTGISQ16647 500 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ALKBH5Q6P6C2 394 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 RSBN1LQ6PCB5 846 aaPredicted RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 BTNL9Q6UXG8 535 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 STXBP4Q6ZWJ1 553 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 H2AFVQ71UI9 128 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF571Q7Z3V5 609 aaPredicted RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC9A9Q8IVB4 645 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 GSPT2Q8IYD1 628 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 CNPY4Q8N129 248 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM133AQ8N9E0 248 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 GMCL1P1Q8NEA9 526 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 TPCN2Q8NHX9 752 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC30A5Q8TAD4 765 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ETNPPLQ8TBG4 499 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 RBM46Q8TBY0 533 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 MORC4Q8TE76 937 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 EEF2KMTQ96G04 330 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 BORCS6Q96GS4 357 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 HES6Q96HZ4 224 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 GMCL1Q96IK5 515 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 DRC1Q96MC2 740 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 KRT12Q99456 494 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 TACO1Q9BSH4 297 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 KANSL2Q9H9L4 492 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 GPCPD1Q9NPB8 672 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ADARB2Q9NS39 739 aaKnown RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ADAMTS1Q9UHI8 967 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 NFU1Q9UMS0 254 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 MTMR7Q9Y216 660 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 JAG2Q9Y219 1238 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 USP20Q9Y2K6 914 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 NFS1Q9Y697 457 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 POTEB3A0JP26 581 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 C5orf60A6NFR6 353 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 POTECB2RU33 542 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GCOM1H8Y6P7 765 aaPredicted RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MEIS2O14770 477 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PMM2O15305 246 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 P4HA2O15460 535 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 SART1O43290 800 aaKnown RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 RAD51CO43502 376 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP1R12BO60237 982 aaPredicted RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MED24O75448 989 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 KIAA0754O94854 1291 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GGPS1O95749 300 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 NR3C1P04150 777 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM153BP0C7A2 387 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 TMEM253P0C7T8 217 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MYZAPP0CAP1 466 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 SPATA31C1P0DKV0 1188 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GUCY2CP25092 1073 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PSMC2P35998 433 aaKnown RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MATR3P43243 847 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF280AP59817 542 aaPredicted RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 UBE2SQ16763 222 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 QRICH1Q2TAL8 776 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC4A8Q2Y0W8 1093 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM153CQ494X1 144 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 POTEBQ6S5H4 581 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 C6orf89Q6UWU4 347 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 NT5DC3Q86UY8 548 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PACS2Q86VP3 889 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 LDHDQ86WU2 507 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 CATSPER3Q86XQ3 398 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 ANKRD13CQ8N6S4 541 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PRPF38AQ8NAV1 312 aaKnown RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MTMR14Q8NCE2 650 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GLIS3Q8NEA6 775 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 MS4A14Q96JA4 679 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GDAP1L1Q96MZ0 367 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 RUNDC3BQ96NL0 473 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 AMNQ9BXJ7 453 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 IDI2Q9BXS1 227 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 STK33Q9BYT3 514 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 RAB17Q9H0T7 212 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms