RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 IDEP14735 1019 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 SARSP49591 514 aaKnown RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 ZNF445P59923 1031 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 PSMC5P62195 406 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 ASIC1P78348 528 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 PRKCEQ02156 737 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 MIS18BP1Q6P0N0 1132 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 LRSAM1Q6UWE0 723 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 OR6J1Q8NGC5 347 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 RAET1EQ8TD07 263 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 GLG1Q92896 1179 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 SMARCE1Q969G3 411 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 FGFBP2Q9BYJ0 223 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 ZNF302Q9NR11 478 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 TBC1D7Q9P0N9 293 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 KLHL42Q9P2K6 505 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 GNEQ9Y223 722 aaKnown RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 COMMD10Q9Y6G5 202 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 CTAGE5O15320 804 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 EYA4O95677 639 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 CYBAP13498 195 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 ANO6Q4KMQ2 910 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 IQSEC1Q6DN90 963 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 SYT2Q8N9I0 419 aaPredicted RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 SH3TC2Q8TF17 1288 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 TRAPPC12Q8WVT3 735 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 PMM1Q92871 262 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 DNAJC19Q96DA6 116 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 IRF2BPLQ9H1B7 796 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 RBSNQ9H1K0 784 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 RNPEPQ9H4A4 650 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 ZHX3Q9H4I2 956 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
USP39-210ENST00000459775 GDAQ9Y2T3 454 aa11.45□□□□□ -0.58
USP39-210ENST00000459775 IGKV6D-21A0A0A0MT36 114 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 PGK1P00558 417 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
USP39-210ENST00000459775 RARRES1P49788 294 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 STAT5BP51692 787 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 XKR9Q5GH70 373 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 RINT1Q6NUQ1 792 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 KANK3Q6NY19 840 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 TLK2Q86UE8 772 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
USP39-210ENST00000459775 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 DPF3Q92784 378 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 FAM210AQ96ND0 272 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 GPRC5CQ9NQ84 441 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 USP25Q9UHP3 1055 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
USP39-210ENST00000459775 USO1O60763 962 aaKnown RBP11.44□□□□□ -0.58
USP39-210ENST00000459775 BDNFP23560 247 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 GIT2Q14161 759 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 PYM1Q9BRP8 204 aaKnown RBP11.44□□□□□ -0.58
USP39-210ENST00000459775 CUEDC2Q9H467 287 aa11.44□□□□□ -0.58
USP39-210ENST00000459775 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 ARHGEF35A5YM69 484 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 STK10O94804 968 aaKnown RBP11.43□□□□□ -0.58
USP39-210ENST00000459775 LGALS2P05162 132 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 KRT18P05783 430 aaKnown RBP11.43□□□□□ -0.58
USP39-210ENST00000459775 FAM200BP0CF97 657 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 GJA8P48165 433 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 STK4Q13043 487 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 LRRC41Q15345 812 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 C1orf186Q6ZWK4 172 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 RDM1Q8NG50 284 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
USP39-210ENST00000459775 CEP170P1Q96L14 293 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 TSPY26PQ9H489 355 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 SLC39A2Q9NP94 309 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 FAM184BQ9ULE4 1060 aa11.43□□□□□ -0.58
USP39-210ENST00000459775 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 OATP04181 439 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 INHAP05111 366 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 GJB1P08034 283 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 MMP3P08254 477 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 CCDC192P0DO97 292 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 MORC3Q14149 939 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 NT5DC1Q5TFE4 455 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 PPTC7Q8NI37 304 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 ATP6V0A1Q93050 837 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms