RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 CIZ1Q9ULV3 898 aaPredicted RBP20.3■□□□□ 0.84
TRIM13-206ENST00000457662 DNM3Q9UQ16 869 aa20.3■□□□□ 0.84
TRIM13-206ENST00000457662 KDM3AQ9Y4C1 1321 aa20.3■□□□□ 0.84
TRIM13-206ENST00000457662 LTBP2Q14767 1821 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 MYH15Q9Y2K3 1946 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 A0A087WWV3 80 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 M0QZ92 97 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 POLGP54098 1239 aaPredicted RBP20.29■□□□□ 0.84
TRIM13-206ENST00000457662 MRPS6P82932 125 aaKnown RBP20.29■□□□□ 0.84
TRIM13-206ENST00000457662 CABP7Q86V35 215 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 CDK5RAP3Q96JB5 506 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 TSHZ2Q9NRE2 1034 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 RCOR1Q9UKL0 485 aa20.29■□□□□ 0.84
TRIM13-206ENST00000457662 GAS2O43903 313 aaKnown RBP20.28■□□□□ 0.84
TRIM13-206ENST00000457662 DGAT1O75907 488 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CHRNA1P02708 482 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 PFKMP08237 780 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CTSHP09668 335 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CLCN3P51790 818 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 KRT85P78386 507 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CDC42EP1Q00587 391 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
TRIM13-206ENST00000457662 LRRC71Q8N4P6 559 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CALML4Q96GE6 196 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CLIC6Q96NY7 704 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CCSER1Q9C0I3 900 aa20.28■□□□□ 0.84
TRIM13-206ENST00000457662 CHRDL2Q6WN34 429 aa20.27■□□□□ 0.84
TRIM13-206ENST00000457662 CELF4Q9BZC1 486 aaKnown RBP20.27■□□□□ 0.84
TRIM13-206ENST00000457662 AKT3Q9Y243 479 aa20.27■□□□□ 0.84
TRIM13-206ENST00000457662 TRPV2Q9Y5S1 764 aa20.27■□□□□ 0.84
TRIM13-206ENST00000457662 CDY2AQ9Y6F7 541 aa20.27■□□□□ 0.84
TRIM13-206ENST00000457662 ARHGEF35A5YM69 484 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 EYA4O95677 639 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 CXCL10P02778 98 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
TRIM13-206ENST00000457662 MGAT3Q09327 533 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 TMEM62Q0P6H9 643 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 GRB10Q13322 594 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 MKRN4PQ13434 485 aaPredicted RBP20.26■□□□□ 0.83
TRIM13-206ENST00000457662 GPNMBQ14956 572 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 C16orf59Q7L2K0 433 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 DEFB128Q7Z7B8 93 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 PNMA5Q96PV4 448 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
TRIM13-206ENST00000457662 CUTAO60888 179 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 NBNO60934 754 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 FGBP02675 491 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 VTNP04004 478 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 ACRP10323 421 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 TXLNAP40222 546 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 EPHB4P54760 987 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 MBTPS1Q14703 1052 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 EMC2Q15006 297 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 SPECC1Q5M775 1068 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
TRIM13-206ENST00000457662 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 EPSTI1Q96J88 318 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 MTRQ99707 1265 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 BHMT2Q9H2M3 363 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 PRO3102Q9H379 93 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 ATP6V0A4Q9HBG4 840 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 SUCLA2Q9P2R7 463 aaPredicted RBP20.25■□□□□ 0.83
TRIM13-206ENST00000457662 CCDC39Q9UFE4 941 aa20.25■□□□□ 0.83
TRIM13-206ENST00000457662 E9PMD0 336 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 ME1P48163 572 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 NLRP11P59045 1033 aaKnown RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 TMEM119Q4V9L6 283 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 TMEM240Q5SV17 173 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 PADI6Q6TGC4 694 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 SYMPKQ92797 1274 aaKnown RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 VWCEQ96DN2 955 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 SCAND2PQ9GZW5 306 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 ASAP2O43150 1006 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 GPR32O75388 356 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 DRP2Q13474 957 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 ZNF365Q70YC5 407 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 MCPH1Q8NEM0 835 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 LEO1Q8WVC0 666 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 PSPC1Q8WXF1 523 aaKnown RBP20.24■□□□□ 0.83
TRIM13-206ENST00000457662 TMEM143Q96AN5 459 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 SPATA32Q96LK8 384 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 PLIN2Q99541 437 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.24■□□□□ 0.838e-10■■■□□ 19.2
TRIM13-206ENST00000457662 XPNPEP1Q9NQW7 623 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 GINS2Q9Y248 185 aa20.24■□□□□ 0.83
TRIM13-206ENST00000457662 TANC1Q9C0D5 1861 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 SCN5AQ14524 2016 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 USO1O60763 962 aaKnown RBP20.23■□□□□ 0.83
TRIM13-206ENST00000457662 ACTN1P12814 892 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 CYP11B2P19099 503 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 KIZQ2M2Z5 673 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 FBXO47Q5MNV8 452 aa20.23■□□□□ 0.83
TRIM13-206ENST00000457662 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms