RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF536O15090 1300 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 ABCB11O95342 1321 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 LCA5LO95447 670 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 EPHB4P54760 987 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 KIAA0753Q2KHM9 967 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 TRMT1LQ7Z2T5 733 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 MYOCDQ8IZQ8 938 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 DEFB129Q9H1M3 183 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 KIF13BQ9NQT8 1826 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 PCDHA2Q9Y5H9 948 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 KDM3AQ9Y4C1 1321 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 HSF2BPO75031 334 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 CIITAP33076 1130 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 NAP1L4Q99733 375 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 EIF2AK1Q9BQI3 630 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
LINC00959-201ENST00000456581 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
LINC00959-201ENST00000456581 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 RAD51CO43502 376 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 RPA1P27694 616 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 HPDP32754 393 aaPredicted RBP13.57□□□□□ -0.24
LINC00959-201ENST00000456581 MTMR2Q13614 643 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 MOXD1Q6UVY6 613 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 TPH2Q8IWU9 490 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 WRAP73Q9P2S5 460 aaPredicted RBP13.57□□□□□ -0.24
LINC00959-201ENST00000456581 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 ALAS1P13196 640 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 SLC9A1P19634 815 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 FLT3P36888 993 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 KCNA1Q09470 495 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 LRRC27Q9C0I9 530 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 EFCC1Q9HA90 598 aa13.57□□□□□ -0.24
LINC00959-201ENST00000456581 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 EBAG9O00559 213 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 PPP1R2P41236 205 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 PTGER2P43116 358 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
LINC00959-201ENST00000456581 MAP3K10Q02779 954 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 PRKG1Q13976 671 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 GIT2Q14161 759 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 TNIP1Q15025 636 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 LRCH2Q5VUJ6 765 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 AJAP1Q9UKB5 411 aaPredicted RBP13.56□□□□□ -0.24
LINC00959-201ENST00000456581 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 NDUFAB1O14561 156 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 ERLIN2O94905 339 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 CYP3A4P08684 503 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 HNRNPH1P31943 449 aaKnown RBP13.56□□□□□ -0.24
LINC00959-201ENST00000456581 SPP2Q13103 211 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 OTOP1Q7RTM1 612 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 ZNF572Q7Z3I7 529 aaPredicted RBP13.56□□□□□ -0.24
LINC00959-201ENST00000456581 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 SH2D3AQ9BRG2 576 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
LINC00959-201ENST00000456581 KCNK3O14649 394 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 PJA2O43164 708 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 COBLL1Q53SF7 1204 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 CCDC65Q8IXS2 484 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
LINC00959-201ENST00000456581 NEUROG2Q9H2A3 272 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 EMILIN3Q9NT22 766 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
LINC00959-201ENST00000456581 ATAD5Q96QE3 1844 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 DCDC2CA8MYV0 355 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 GOLGA8KD6RF30 607 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 TBX3O15119 743 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 PSMD10O75832 226 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 FLOT1O75955 427 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 SLITRK3O94933 977 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 MYBP10242 640 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 ITGB5P18084 799 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 HOXD13P35453 343 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 PTK2Q05397 1052 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 LRRC63Q05C16 580 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 KLHL30Q0D2K2 578 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 CEP55Q53EZ4 464 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms