RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ZYXQ15942 572 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ENOX2Q16206 610 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ZC2HC1CQ53FD0 456 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 MIGA2Q7L4E1 593 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF720Q7Z2F6 126 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ZFP91Q96JP5 570 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 IKZF4Q9H2S9 585 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 AJAP1Q9UKB5 411 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 PCDHB13Q9Y5F0 798 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 UBE4BO95155 1302 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 ANXA13P27216 316 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 TNNT3P45378 269 aaPredicted RBP20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 TCERG1LQ5VWI1 586 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 GSPT2Q8IYD1 628 aaKnown RBP20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 CCDC102AQ96A19 550 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 SELENOOQ9BVL4 669 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 KCND2Q9NZV8 630 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 SYF2O95926 243 aaKnown RBP20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 PSMC2P35998 433 aaKnown RBP20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 HSD17B4P51659 736 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 CFAP221Q4G0U5 840 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 HSP90B2PQ58FF3 399 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 MKNK1Q9BUB5 465 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 TEKT3Q9BXF9 490 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 LCMT1Q9UIC8 334 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 ODF2LQ9ULJ1 636 aa20.1■□□□□ 0.81
SEMA3B-209ENST00000456560 GRID2IPA4D2P6 1211 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 MYO1CO00159 1063 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 FAM186BQ8IYM0 893 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 MS4A14Q96JA4 679 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 RIT2Q99578 217 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 MXRA8Q9BRK3 442 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 RBM12Q9NTZ6 932 aaKnown RBP20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 DMAC2Q9NW81 257 aa20.09■□□□□ 0.81
SEMA3B-209ENST00000456560 FTCDO95954 541 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 MATR3P43243 847 aaKnown RBP eCLIP20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 RASSF4Q9H2L5 321 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 GCNT4Q9P109 453 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 NAGPAQ9UK23 515 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF536O15090 1300 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 ATP8B3O60423 1300 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 RPTORQ8N122 1335 aa20.08■□□□□ 0.81
SEMA3B-209ENST00000456560 GUCY2CP25092 1073 aa20.08■□□□□ 0.8
SEMA3B-209ENST00000456560 COG2Q14746 738 aa20.08■□□□□ 0.8
SEMA3B-209ENST00000456560 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.8
SEMA3B-209ENST00000456560 STRA6Q9BX79 667 aa20.08■□□□□ 0.8
SEMA3B-209ENST00000456560 IPO5O00410 1097 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 ICAM1P05362 532 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 IVLP07476 585 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 TNFRSF8P28908 595 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 INPP5BP32019 993 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 GLE1Q53GS7 698 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 KSR1Q8IVT5 923 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 C10orf67Q8IYJ2 551 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 AGBL1Q96MI9 1066 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 GDAP1L1Q96MZ0 367 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 BCRP11274 1271 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 ITGB5P18084 799 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 MAPK7Q13164 816 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 GJB7Q6PEY0 223 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 SRLQ86TD4 932 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 LXNQ9BS40 222 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 STIM2Q9P246 746 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 ZNRF3Q9ULT6 936 aa20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 RRP15Q9Y3B9 282 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-209ENST00000456560 PHACTR2O75167 634 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 ASNSP08243 561 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 TGFB2P61812 414 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 SLC7A5Q01650 507 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 ALKBH5Q6P6C2 394 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 STXBP4Q6ZWJ1 553 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 FAM178BQ8IXR5 827 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 NEK9Q8TD19 979 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 INPP4AQ96PE3 977 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 HINFPQ9BQA5 517 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 AGPAT3Q9NRZ7 376 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 TRIM66O15016 1216 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 PPP1R37O75864 691 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 MRPS25P82663 173 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 DAW1Q8N136 415 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 BANK1Q8NDB2 785 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 CLEC4DQ8WXI8 215 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 PIM2Q9P1W9 311 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 COL20A1Q9P218 1284 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 CCPG1Q9ULG6 757 aa20.06■□□□□ 0.8
SEMA3B-209ENST00000456560 AGPSO00116 658 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 PPP1R12BO60237 982 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 FERP16591 822 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 FMO5P49326 533 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 GHRHRQ02643 423 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 ODR4Q5SWX8 454 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 HS2ST1Q7LGA3 356 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 OLIG1Q8TAK6 271 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms