RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZNF710Q8N1W2 664 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 CEP89Q96ST8 783 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 CELF4Q9BZC1 486 aaKnown RBP19.45■□□□□ 0.7
USP39-208ENST00000455732 TTC12Q9H892 705 aaPredicted RBP19.45■□□□□ 0.7
USP39-208ENST00000455732 SEPT9Q9UHD8 586 aaPredicted RBP19.45■□□□□ 0.7
USP39-208ENST00000455732 INSL6Q9Y581 213 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 COL4A6Q14031 1691 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 RALGAPA2Q2PPJ7 1873 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 RFXAPO00287 272 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 POU3F3P20264 500 aaPredicted RBP19.44■□□□□ 0.7
USP39-208ENST00000455732 FAM43BQ6ZT52 329 aaPredicted RBP19.44■□□□□ 0.7
USP39-208ENST00000455732 NEK9Q8TD19 979 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 SP7Q8TDD2 431 aaPredicted RBP19.44■□□□□ 0.7
USP39-208ENST00000455732 ARNTL2Q8WYA1 636 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 LXNQ9BS40 222 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
USP39-208ENST00000455732 LINC01553A4QN01 128 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 H3BQV1 296 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 OR52Z1P0C646 297 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 IGFBP4P22692 258 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 TMOD1P28289 359 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 CD52P31358 61 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 TXKP42681 527 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 TBC1D8BQ0IIM8 1120 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 ANO5Q75V66 913 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 METTL13Q8N6R0 699 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 HSD17B14Q9BPX1 270 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 ZSWIM4Q9H7M6 989 aa19.43■□□□□ 0.7
USP39-208ENST00000455732 WRAP73Q9P2S5 460 aaPredicted RBP19.43■□□□□ 0.7
USP39-208ENST00000455732 IGKV6-21A0A0C4DH24 114 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 ENPP3O14638 875 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 LPXNO60711 386 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 LYPLA2O95372 231 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 TOB1P50616 345 aaPredicted RBP19.42■□□□□ 0.7
USP39-208ENST00000455732 CLCN3P51790 818 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 ERVK-21P61565 698 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 ZNF174Q15697 407 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 MTERF2Q49AM1 385 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 EFCAB12Q6NXP0 572 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 LINC01599Q8WXQ3 324 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 INTS4Q96HW7 963 aaKnown RBP19.42■□□□□ 0.7
USP39-208ENST00000455732 DYDC2Q96IM9 177 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 MAP7D2Q96T17 732 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
USP39-208ENST00000455732 CDHR5Q9HBB8 845 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 RGL1Q9NZL6 768 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 PADI3Q9ULW8 664 aa19.42■□□□□ 0.7
USP39-208ENST00000455732 TTC28Q96AY4 2481 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 K7ELQ4 463 aaPredicted RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 GPR32O75388 356 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 SLITRK3O94933 977 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 UPP2O95045 317 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 CRYBB1P53674 252 aaPredicted RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 LARP1BQ659C4 914 aaKnown RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 RTN4RL1Q86UN2 441 aaPredicted RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 C4orf32Q8N8J7 132 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 SNX21Q969T3 373 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 TGS1Q96RS0 853 aaKnown RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 JPH2Q9BR39 696 aaPredicted RBP19.41■□□□□ 0.7
USP39-208ENST00000455732 CYP26B1Q9NR63 512 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 MTCH2Q9Y6C9 303 aa19.41■□□□□ 0.7
USP39-208ENST00000455732 POTEMA6NI47 508 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 MAFO75444 373 aaPredicted RBP19.4■□□□□ 0.7
USP39-208ENST00000455732 YWHABP31946 246 aaKnown RBP19.4■□□□□ 0.7
USP39-208ENST00000455732 CYP4A11Q02928 519 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 NBR1Q14596 966 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 RILPL1Q5EBL4 403 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 PLA2G4FQ68DD2 849 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 MCTP1Q6DN14 999 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 EXOC8Q8IYI6 725 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 LRRC71Q8N4P6 559 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 TMEM40Q8WWA1 233 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 SYMPKQ92797 1274 aaKnown RBP19.4■□□□□ 0.7
USP39-208ENST00000455732 FTHL17Q9BXU8 183 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 AKT3Q9Y243 479 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 BRWD1Q9NSI6 2320 aa19.4■□□□□ 0.7
USP39-208ENST00000455732 LAD1O00515 517 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 VTNP04004 478 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 PDCP20941 246 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 FXR2P51116 673 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP39-208ENST00000455732 CDC42EP1Q00587 391 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 PAK2Q13177 524 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 GRB10Q13322 594 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 CTTNQ14247 550 aaKnown RBP19.39■□□□□ 0.69
USP39-208ENST00000455732 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 OTUD6AQ7L8S5 288 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 CRIPAKQ8N1N5 446 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 PPM1EQ8WY54 764 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 YME1L1Q96TA2 773 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 ADAMTS10Q9H324 1103 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 TMX1Q9H3N1 280 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 SUGCTQ9HAC7 445 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 RC3H2Q9HBD1 1191 aaKnown RBP19.39■□□□□ 0.69
USP39-208ENST00000455732 GINS2Q9Y248 185 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.69
USP39-208ENST00000455732 PCDHB6Q9Y5E3 794 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 ARID2Q68CP9 1835 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms