RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 PDHXO00330 501 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 TRAF5O00463 557 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 MFAP3LO75121 409 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 CCNE2O96020 404 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 EPB41P11171 864 aaKnown RBP7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 PSMC2P35998 433 aaKnown RBP7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 GJA5P36382 358 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 UBXN2AP68543 259 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 ZBED6P86452 979 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 TBC1D8BQ0IIM8 1120 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 DGKZQ13574 1117 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 LAMC2Q13753 1193 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 TTLL4Q14679 1199 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 ARMCX5Q6P1M9 558 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC170Q8IYT3 715 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 OR8K1Q8NGG5 319 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 SMCR8Q8TEV9 937 aaPredicted RBP7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM81BQ96LP2 452 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 PRIMPOLQ96LW4 560 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 DNAJC7Q99615 494 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 BAG1Q99933 345 aaPredicted RBP7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 GBP3Q9H0R5 595 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 NDST4Q9H3R1 872 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 PLCB1Q9NQ66 1216 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 DMAC2Q9NW81 257 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 USP20Q9Y2K6 914 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 PAXBP1Q9Y5B6 917 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.2
ECHDC1-210ENST00000454859 COL1A2P08123 1366 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 CHMP2AO43633 222 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 STBD1O95210 358 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 PMS1P54277 932 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 POU5F1Q01860 360 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 POU5F1BQ06416 359 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 SREBF2Q12772 1141 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 MAPK7Q13164 816 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 DMP1Q13316 513 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ADAM9Q13443 819 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 TUBB2AQ13885 445 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ODR4Q5SWX8 454 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 CYP26C1Q6V0L0 522 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 TC2NQ8N9U0 490 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 TCP11Q8WWU5 503 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 BBXQ8WY36 941 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 IFT74Q96LB3 600 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 FIZ1Q96SL8 496 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 TUBB2BQ9BVA1 445 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 RRAGCQ9HB90 399 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ATP6V0A4Q9HBG4 840 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ZNF302Q9NR11 478 aa7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 ARMCX3Q9UH62 379 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 LUC7L2Q9Y383 392 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-210ENST00000454859 BTBD19C9JJ37 291 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 ATP9AO75110 1047 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 HIP1RO75146 1068 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 FARP2O94887 1054 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CELF2O95319 508 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GCNT3O95395 438 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 TAL1P17542 331 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CDC42EP1Q00587 391 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GRB14Q14449 540 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 MEA1Q16626 185 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CCDC40Q4G0X9 1142 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 BRDTQ58F21 947 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 XKR9Q5GH70 373 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 MIIPQ5JXC2 388 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CELF3Q5SZQ8 465 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CCDC62Q6P9F0 684 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 BANK1Q8NDB2 785 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 PIGOQ8TEQ8 1089 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 BRI3BPQ8WY22 251 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GJA10Q969M2 543 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 SMARCAD1Q9H4L7 1026 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 MYO1AQ9UBC5 1043 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 FRMD4BQ9Y2L6 1034 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 ZSWIM8A7E2V4 1837 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 ADGRA2Q96PE1 1338 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 TRIM49BA6NDI0 452 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 ASAP2O43150 1006 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GFPT2O94808 682 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 ALDH1A1P00352 501 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 PIGRP01833 764 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 NR3C1P04150 777 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 OATP04181 439 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 NR2F2P24468 414 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GTF2H1P32780 548 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 EFNA5P52803 228 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 MAP1SQ66K74 1059 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 IQSEC1Q6DN90 963 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 INTS8Q75QN2 995 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms