RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 COL6A1P12109 1028 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 MAPK7Q13164 816 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 CUL4BQ13620 913 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 GIT2Q14161 759 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 KCNB1Q14721 858 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 GRIK4Q16099 956 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 MARCH8Q5T0T0 291 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 UNC13DQ70J99 1090 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 DDX12PQ92771 950 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
TRAF4-206ENST00000454852 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 GRIN2DO15399 1336 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 CENPFP49454 3210 aa12.5□□□□□ -0.41
TRAF4-206ENST00000454852 A0A1W2PQ45 241 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-206ENST00000454852 A0A1W2PQY0 241 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 SMC2O95347 1197 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 RPLP2P05387 115 aaKnown RBP12.49□□□□□ -0.41
TRAF4-206ENST00000454852 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAF4-206ENST00000454852 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 GNAT1P11488 350 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 ARL2P36404 184 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 AFMP43652 599 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 PNOCQ13519 176 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 EMC2Q15006 297 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 C1orf53Q5VUE5 145 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
TRAF4-206ENST00000454852 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 DAW1Q8N136 415 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 TCP11Q8WWU5 503 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 STAMQ92783 540 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 KIFAP3Q92845 792 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
TRAF4-206ENST00000454852 SEL1LQ9UBV2 794 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 KCNG1Q9UIX4 513 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 PCDHA5Q9Y5H7 936 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
TRAF4-206ENST00000454852 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 SMIM35A0A1B0GVV1 85 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 GAP43P17677 238 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 SCP2P22307 547 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 CDK7P50613 346 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 ITGA7Q13683 1181 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 SNX17Q15036 470 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 CAMK4Q16566 473 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 IER5Q5VY09 327 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 NTPCRQ9BSD7 190 aaKnown RBP12.48□□□□□ -0.41
TRAF4-206ENST00000454852 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 OLFML3Q9NRN5 406 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
TRAF4-206ENST00000454852 ARVCFO00192 962 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 HIP1RO75146 1068 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
TRAF4-206ENST00000454852 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
TRAF4-206ENST00000454852 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
TRAF4-206ENST00000454852 KLRC1P26715 233 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 ASIC1P78348 528 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 CDC42EP1Q00587 391 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 POU5F1BQ06416 359 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 PSMD2Q13200 908 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 HIC1Q14526 733 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 TAF2Q6P1X5 1199 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 SPIRE2Q8WWL2 714 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 SMARCE1Q969G3 411 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 SH2D3AQ9BRG2 576 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 ST6GALNAC4Q9H4F1 302 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
TRAF4-206ENST00000454852 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms