RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 LRRC1Q9BTT6 524 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 SAYSD1Q9NPB0 183 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 BAG5Q9UL15 447 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 H0Y3Z8 333 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ABL1P00519 1130 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 CHGBP05060 677 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 BRAFP15056 766 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 NR1I3Q14994 352 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 RNF207Q6ZRF8 634 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 MORC4Q8TE76 937 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 RAD54LQ92698 747 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 IPO11Q9UI26 975 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TRIM66O15016 1216 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 MX2P20592 715 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 STAT2P52630 851 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 UBXN2AP68543 259 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 GUCY1A3Q02108 690 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 SRRM1Q8IYB3 904 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 A0A0G2JND7 137 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 GOLGA8SH3BPF8 625 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TTI1O43156 1089 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TJP3O95049 919 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■■□□□ 14
SEC16A-207ENST00000453963 ADRA2BP18089 450 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 KPNA2P52292 529 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 PRPSAP1Q14558 356 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 FAM96AQ9H5X1 160 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ZFP69BQ9UJL9 534 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 TRPA1O75762 1119 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 ARL4CP56559 192 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 PHEXP78562 749 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 AP3B2Q13367 1082 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 BYSLQ13895 437 aaKnown RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 DHX34Q14147 1143 aaKnown RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 UBE2SQ16763 222 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 GRAMD1BQ3KR37 738 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 ARMC2Q8NEN0 867 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 ETNK1Q9HBU6 452 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 AFF2P51816 1311 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 MED7O43513 233 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 NR3C1P04150 777 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 DYNLT1P63172 113 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 DYNC1I2Q13409 638 aaKnown RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 HDAC11Q96DB2 347 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 CDHR1Q96JP9 859 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 YIPF3Q9GZM5 350 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
SEC16A-207ENST00000453963 SNAP23O00161 211 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 HAUS5O94927 633 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 CDK8P49336 464 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 PCGF5Q86SE9 256 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 CCT8L2Q96SF2 557 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 BATF3Q9NR55 127 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
SEC16A-207ENST00000453963 GGPS1O95749 300 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.35
SEC16A-207ENST00000453963 CAPRIN2Q6IMN6 1127 aaKnown RBP12.9□□□□□ -0.35
SEC16A-207ENST00000453963 BBS5Q8N3I7 341 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.35
SEC16A-207ENST00000453963 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 RPS6KC1Q96S38 1066 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 ECT2Q9H8V3 914 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.35
SEC16A-207ENST00000453963 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.35
SEC16A-207ENST00000453963 HPCAL4Q9UM19 191 aa12.9□□□□□ -0.35
SEC16A-207ENST00000453963 COASYQ13057 564 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 KCTD6Q8NC69 237 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-207ENST00000453963 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 COPEO14579 308 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 ART3Q13508 389 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 CHP1Q99653 195 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms