RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ASTE1Q2TB18 679 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 COBLL1Q53SF7 1204 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CFAP157Q5JU67 520 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 GALNT17Q6IS24 598 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 C3orf62Q6ZUJ4 267 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SMYD4Q8IYR2 804 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 RASGEF1CQ8N431 466 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CSGALNACT2Q8N6G5 542 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 NAT14Q8WUY8 206 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ANKS1AQ92625 1134 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 STMN2Q93045 179 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ITPKCQ96DU7 683 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 LRRC37BQ96QE4 947 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PUS3Q9BZE2 481 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CUEDC2Q9H467 287 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 VPS54Q9P1Q0 977 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SUCLA2Q9P2R7 463 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CHMP2BQ9UQN3 213 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 STXBP5LQ9Y2K9 1186 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 STARD13Q9Y3M8 1113 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PITPNM2Q9BZ72 1349 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 RASGRF2O14827 1237 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 CBFA2T3O75081 653 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 RHOBTB3O94955 611 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 EIF2S1P05198 315 aaKnown RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 VAV1P15498 845 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 PORP16435 677 aaPredicted RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 RASA1P20936 1047 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 LONP1P36776 959 aaKnown RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 GPSM2P81274 684 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 GRIN1Q05586 938 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 EHHADHQ08426 723 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 TFCP2Q12800 502 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 DCTN2Q13561 401 aaKnown RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 BTG3Q14201 252 aaPredicted RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 MYBPC2Q14324 1141 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 INAQ16352 499 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 MAP7D1Q3KQU3 841 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 VWA3BQ502W6 1294 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 ZCWPW2Q504Y3 356 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 GRAMD4Q6IC98 578 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 B3GNT6Q6ZMB0 384 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 LRRC74BQ6ZQY2 392 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 HS2ST1Q7LGA3 356 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 KRT26Q7Z3Y9 468 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 EXOC3L1Q86VI1 746 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 SPATA24Q86W54 205 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 BHMTQ93088 406 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 MTMR8Q96EF0 704 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 EPSTI1Q96J88 318 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 SERPINB12Q96P63 405 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 SPZ1Q9BXG8 430 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 TBC1D10AQ9BXI6 508 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 OXCT2Q9BYC2 517 aaPredicted RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 SMARCAL1Q9NZC9 954 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 ZMYND8Q9ULU4 1186 aaPredicted RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
SMCO1-202ENST00000452776 NOC2LQ9Y3T9 749 aaKnown RBP9.04□□□□□ -0.96
SMCO1-202ENST00000452776 MYO5BQ9ULV0 1848 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 ARHGAP10A1A4S6 786 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 DCDC2CA8MYV0 355 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 KCNK3O14649 394 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 FOXP2O15409 715 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 DAPK3O43293 454 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 HNRNPRO43390 633 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CCDC22O60826 627 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 S100A1P23297 94 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 XIAPP98170 497 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 STRN3Q13033 797 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CCDC153Q494R4 210 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 AKNAD1Q5T1N1 836 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 TTI2Q6NXR4 508 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 FOXR2Q6PJQ5 311 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 LSM14AQ8ND56 463 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 ZNF398Q8TD17 642 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 DQX1Q8TE96 717 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 UCMAQ8WVF2 138 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 SPIRE2Q8WWL2 714 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 KAZALD1Q96I82 304 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 AIFM3Q96NN9 605 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 AZI2Q9H6S1 392 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 NLRC4Q9NPP4 1024 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 GPHNQ9NQX3 736 aaPredicted RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 FGFR1OP2Q9NVK5 253 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 RHBDL2Q9NX52 303 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CROTQ9UKG9 612 aa9.03□□□□□ -0.96
SMCO1-202ENST00000452776 CD2APQ9Y5K6 639 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms