RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
USP54-207ENST00000451492 NME8Q8N427 588 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 FIBCD1Q8N539 461 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
USP54-207ENST00000451492 IL17RAQ96F46 866 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 MBOAT7Q96N66 472 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 TMX1Q9H3N1 280 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 NRBP2Q9NSY0 501 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 LRFN2Q9ULH4 789 aa10.89□□□□□ -0.67
USP54-207ENST00000451492 KDM3AQ9Y4C1 1321 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 DDX11L8A8MPP1 907 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 WNT7AO00755 349 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 GCFC2P16383 781 aaKnown RBP10.88□□□□□ -0.67
USP54-207ENST00000451492 FGFR4P22455 802 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 TMOD1P28289 359 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 NLRP11P59045 1033 aaKnown RBP10.88□□□□□ -0.67
USP54-207ENST00000451492 CYP4A11Q02928 519 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 DRP2Q13474 957 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 BTG3Q14201 252 aaPredicted RBP10.88□□□□□ -0.67
USP54-207ENST00000451492 RTN4RL1Q86UN2 441 aaPredicted RBP10.88□□□□□ -0.67
USP54-207ENST00000451492 FAM228AQ86W67 206 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 FTHL17Q9BXU8 183 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
USP54-207ENST00000451492 ERVK-5Q9HDB9 667 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 VAV3Q9UKW4 847 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 ST3GAL5Q9UNP4 418 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
USP54-207ENST00000451492 MAGEB2O15479 319 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 GPR32O75388 356 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
USP54-207ENST00000451492 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
USP54-207ENST00000451492 GPM6BQ13491 265 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 GNL2Q13823 731 aaKnown RBP10.87□□□□□ -0.67
USP54-207ENST00000451492 CTTNQ14247 550 aaKnown RBP10.87□□□□□ -0.67
USP54-207ENST00000451492 CALCRLQ16602 461 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 PPP4R3AQ6IN85 833 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 NPAS4Q8IUM7 802 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 HAS1Q92839 578 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 TNFRSF25Q93038 417 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 DYDC2Q96IM9 177 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 C8orf76Q96K31 380 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 KIF2CQ99661 725 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 NAP1L4Q99733 375 aaKnown RBP10.87□□□□□ -0.67
USP54-207ENST00000451492 ADAM2Q99965 735 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 LXNQ9BS40 222 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 KCNMB3Q9NPA1 279 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 SQORQ9Y6N5 450 aa10.87□□□□□ -0.67
USP54-207ENST00000451492 GPR182O15218 404 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 NEMFO60524 1076 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 STAG3L1P0CL83 205 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 SARSP49591 514 aaKnown RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 GPC3P51654 580 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 KCNQ1P51787 676 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 CRYBB1P53674 252 aaPredicted RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 NPEPPSP55786 919 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 PSMC5P62195 406 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 SAFBQ15424 915 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP54-207ENST00000451492 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 RHPN2Q8IUC4 686 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 LINC01465Q8N7H1 131 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 RNF169Q8NCN4 708 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 FAM20AQ96MK3 541 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 NLRP4Q96MN2 994 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 RC3H2Q9HBD1 1191 aaKnown RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 RGL1Q9NZL6 768 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
USP54-207ENST00000451492 MRPL42Q9Y6G3 142 aaKnown RBP10.86□□□□□ -0.67
USP54-207ENST00000451492 A0A087WZ62 844 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 TBKBP1A7MCY6 615 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 DGKIO75912 1065 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 STBD1O95210 358 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 FGFR1P11362 822 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 MCM7P33993 719 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 TXKP42681 527 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 QARSP47897 775 aaKnown RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 ANO5Q75V66 913 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 KSR1Q8IVT5 923 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 SLFN12Q8IYM2 578 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 CEP170P1Q96L14 293 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 CCDC43Q96MW1 224 aaKnown RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 SAMD11Q96NU1 681 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 FDXACB1Q9BRP7 624 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms