RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 LOC102724159A0A0B4J2E5 919 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 I3L4J1 428 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 CIB2O75838 187 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 KRT14P02533 472 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 USP11P51784 963 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 ZNF211Q13398 564 aaPredicted RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 DRAP1Q14919 205 aaPredicted RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 PWP2Q15269 919 aaKnown RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 RHOT2Q8IXI1 618 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 MLXIPLQ9NP71 852 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 NXF1Q9UBU9 619 aaKnown RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 ANAPC5Q9UJX4 755 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 ABL1P00519 1130 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 TROVE2P10155 538 aaKnown RBP eCLIP7.72□□□□□ -1.17
BEST1-202ENST00000449131 CD58P19256 250 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 FGFR2P21802 821 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 PHBP35232 272 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 GUCY1A3Q02108 690 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 CUL1Q13616 776 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 EARS2Q5JPH6 523 aaKnown RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 ZNF746Q6NUN9 644 aaPredicted RBP7.72□□□□□ -1.17
BEST1-202ENST00000449131 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 TRIM65Q6PJ69 517 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 SP8Q8IXZ3 490 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 XXYLT1Q8NBI6 393 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 PRDM16Q9HAZ2 1276 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 LCMT1Q9UIC8 334 aa7.72□□□□□ -1.17
BEST1-202ENST00000449131 MST1RQ04912 1400 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 A0A087WUV0 522 aaPredicted RBP7.71□□□□□ -1.17
BEST1-202ENST00000449131 CCDC160A6NGH7 325 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 WTIPA6NIX2 430 aaPredicted RBP7.71□□□□□ -1.17
BEST1-202ENST00000449131 SGK1O00141 431 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 NDC80O14777 642 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 RASGRF2O14827 1237 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 PDHBP11177 359 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 PEX19P40855 299 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 OSTNP61366 133 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 FAM160B1Q5W0V3 765 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 GLYCTKQ8IVS8 523 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 TRIM11Q96F44 468 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 RILPQ96NA2 401 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 EIF2AK1Q9BQI3 630 aaKnown RBP7.71□□□□□ -1.17
BEST1-202ENST00000449131 ADPGKQ9BRR6 497 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 PPP1R12CQ9BZL4 782 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 ZMYND12Q9H0C1 365 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 RAVER2Q9HCJ3 691 aaKnown RBP7.71□□□□□ -1.17
BEST1-202ENST00000449131 HESX1Q9UBX0 185 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 SNX12Q9UMY4 172 aa7.71□□□□□ -1.17
BEST1-202ENST00000449131 H7C0C1 242 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 K7ERI5 159 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 SLC16A4O15374 487 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 NMT1P30419 496 aaKnown RBP7.71□□□□□ -1.18
BEST1-202ENST00000449131 ATP5OP48047 213 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 ERVK-24P63145 666 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 DYNLT1P63172 113 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 MTMR1Q13613 665 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 EZH2Q15910 746 aaKnown RBP7.71□□□□□ -1.18
BEST1-202ENST00000449131 RNF207Q6ZRF8 634 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 SRLQ86TD4 932 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 COG1Q8WTW3 980 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 RMDN3Q96TC7 470 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 RIOK1Q9BRS2 568 aaKnown RBP7.71□□□□□ -1.18
BEST1-202ENST00000449131 EDEM3Q9BZQ6 932 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 ABCB11O95342 1321 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 SPATA31A1Q5TZJ5 1347 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 ZNF233A6NK53 670 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 HMGB1P1B2RPK0 211 aaPredicted RBP7.71□□□□□ -1.18
BEST1-202ENST00000449131 MAN1A1P33908 653 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 PSMC4P43686 418 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 RWDD2BP57060 319 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 YWHAGP61981 247 aaKnown RBP eCLIP7.71□□□□□ -1.18
BEST1-202ENST00000449131 ALCAMQ13740 583 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 SEC23AQ15436 765 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 MAP7D1Q3KQU3 841 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 C16orf86Q6ZW13 317 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 ADGRA1Q86SQ6 560 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 EFCAB13Q8IY85 973 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 TTLL6Q8N841 843 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 OR2W6PQ8NHA6 318 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 CDHR1Q96JP9 859 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 FAM117AQ9C073 453 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
BEST1-202ENST00000449131 PEAK1Q9H792 1746 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 LRRIQ3A6PVS8 624 aaPredicted RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 IPO5O00410 1097 aaKnown RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 SUN1O94901 812 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 ACSL3O95573 720 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 CCND2P30279 289 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 LMNB2Q03252 620 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 FAM133BQ5BKY9 247 aaKnown RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 CIAPIN1Q6FI81 312 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 MIS18BP1Q6P0N0 1132 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 ELOA2Q8IYF1 753 aaPredicted RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 SH2D3AQ9BRG2 576 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 MRPL47Q9HD33 250 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms