RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PPTC7Q8NI37 304 aa27.52■■■□□ 2
RFFL-206ENST00000447669 ZBTB10Q96DT7 871 aa27.52■■■□□ 2
RFFL-206ENST00000447669 RNPEPQ9H4A4 650 aa27.52■■■□□ 2
RFFL-206ENST00000447669 ZNF18P17022 549 aa27.51■■■□□ 2
RFFL-206ENST00000447669 PLCB4Q15147 1175 aa27.51■■■□□ 2
RFFL-206ENST00000447669 PTPN21Q16825 1174 aa27.51■■■□□ 2
RFFL-206ENST00000447669 COBLL1Q53SF7 1204 aa27.51■■■□□ 2
RFFL-206ENST00000447669 CREBRFQ8IUR6 639 aa27.51■■■□□ 2
RFFL-206ENST00000447669 PPP1R13LQ8WUF5 828 aa27.51■■■□□ 2
RFFL-206ENST00000447669 TRAPPC12Q8WVT3 735 aa27.51■■■□□ 2
RFFL-206ENST00000447669 CEP89Q96ST8 783 aa27.51■■■□□ 2
RFFL-206ENST00000447669 GNEQ9Y223 722 aaKnown RBP27.51■■■□□ 2
RFFL-206ENST00000447669 LGALS2P05162 132 aa27.51■■□□□ 1.99
RFFL-206ENST00000447669 ELNP15502 786 aa27.51■■□□□ 1.99
RFFL-206ENST00000447669 KIF22Q14807 665 aa27.51■■□□□ 1.99
RFFL-206ENST00000447669 CFHR5Q9BXR6 569 aa27.51■■□□□ 1.99
RFFL-206ENST00000447669 PDLIM7Q9NR12 457 aa27.51■■□□□ 1.99
RFFL-206ENST00000447669 GPR25O00155 361 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 CENPPQ6IPU0 288 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 EPM2AIP1Q7L775 607 aaPredicted RBP27.5■■□□□ 1.99
RFFL-206ENST00000447669 BSNDQ8WZ55 320 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 EMID1Q96A84 441 aaPredicted RBP27.5■■□□□ 1.99
RFFL-206ENST00000447669 NIFKQ9BYG3 293 aaKnown RBP27.5■■□□□ 1.99
RFFL-206ENST00000447669 GAP43P17677 238 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 TPM4P67936 248 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 FANCCQ00597 558 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 FAM178BQ8IXR5 827 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 TMEM143Q96AN5 459 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 KIFC3Q9BVG8 833 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 SRRTQ9BXP5 876 aaKnown RBP27.5■■□□□ 1.99
RFFL-206ENST00000447669 OLFML3Q9NRN5 406 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 IFNKQ9P0W0 207 aa27.5■■□□□ 1.99
RFFL-206ENST00000447669 EMSYQ7Z589 1322 aa27.49■■□□□ 1.99
RFFL-206ENST00000447669 XRCC5P13010 732 aaKnown RBP27.49■■□□□ 1.99
RFFL-206ENST00000447669 CDK11BP21127 795 aaKnown RBP27.49■■□□□ 1.99
RFFL-206ENST00000447669 ZNF75DP51815 510 aa27.49■■□□□ 1.99
RFFL-206ENST00000447669 PLPPR4Q7Z2D5 763 aa27.49■■□□□ 1.99
RFFL-206ENST00000447669 SMARCAD1Q9H4L7 1026 aa27.49■■□□□ 1.99
RFFL-206ENST00000447669 NRBP2Q9NSY0 501 aa27.49■■□□□ 1.99
RFFL-206ENST00000447669 ZBTB42B2RXF5 422 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 MMP3P08254 477 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 POLGP54098 1239 aaPredicted RBP27.48■■□□□ 1.99
RFFL-206ENST00000447669 PEX3P56589 373 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 TARBP2Q15633 366 aaKnown RBP27.48■■□□□ 1.99
RFFL-206ENST00000447669 ZNF720Q7Z2F6 126 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 IRF2BP1Q8IU81 584 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 NAP1L5Q96NT1 182 aaPredicted RBP27.48■■□□□ 1.99
RFFL-206ENST00000447669 C16orf70Q9BSU1 422 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 NKRFO15226 690 aaKnown RBP eCLIP27.48■■□□□ 1.995e-10■■■□□ 17.6
RFFL-206ENST00000447669 DGAT1O75907 488 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 EMC2Q15006 297 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 CDKAL1Q5VV42 579 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 SARM1Q6SZW1 724 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 TLK2Q86UE8 772 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 CSGALNACT2Q8N6G5 542 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 XPO4Q9C0E2 1151 aaKnown RBP27.48■■□□□ 1.99
RFFL-206ENST00000447669 KCTD10Q9H3F6 313 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 TRPC6Q9Y210 931 aa27.48■■□□□ 1.99
RFFL-206ENST00000447669 PLS3P13797 630 aa27.47■■□□□ 1.99
RFFL-206ENST00000447669 DRP2Q13474 957 aa27.47■■□□□ 1.99
RFFL-206ENST00000447669 ATP8B4Q8TF62 1192 aa27.47■■□□□ 1.99
RFFL-206ENST00000447669 PDLIM2Q96JY6 352 aa27.47■■□□□ 1.99
RFFL-206ENST00000447669 ATP6V0A4Q9HBG4 840 aa27.47■■□□□ 1.99
RFFL-206ENST00000447669 SERPINC1P01008 464 aa27.46■■□□□ 1.99
RFFL-206ENST00000447669 CHMP4BP1P59074 171 aa27.46■■□□□ 1.99
RFFL-206ENST00000447669 BEX3Q00994 111 aa27.46■■□□□ 1.99
RFFL-206ENST00000447669 SPC24Q8NBT2 197 aa27.46■■□□□ 1.99
RFFL-206ENST00000447669 BBXQ8WY36 941 aaPredicted RBP27.46■■□□□ 1.99
RFFL-206ENST00000447669 GTPBP4Q9BZE4 634 aaKnown RBP27.46■■□□□ 1.99
RFFL-206ENST00000447669 DHX33Q9H6R0 707 aaKnown RBP27.46■■□□□ 1.99
RFFL-206ENST00000447669 SLC16A4O15374 487 aa27.46■■□□□ 1.99
RFFL-206ENST00000447669 ZNF296Q8WUU4 475 aaPredicted RBP27.46■■□□□ 1.99
RFFL-206ENST00000447669 POLR3FQ9H1D9 316 aaPredicted RBP27.46■■□□□ 1.99
RFFL-206ENST00000447669 K7ENM7 598 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 PPFIA4O75335 1185 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 CNGA1P29973 690 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 IGBP1P78318 339 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 ZCWPW2Q504Y3 356 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 DRC1Q96MC2 740 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 PPP1R9BQ96SB3 815 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 ERAP1Q9NZ08 941 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 LARSQ9P2J5 1176 aaKnown RBP27.45■■□□□ 1.99
RFFL-206ENST00000447669 FAM184BQ9ULE4 1060 aa27.45■■□□□ 1.99
RFFL-206ENST00000447669 BICDL2A1A5D9 508 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 CYBAP13498 195 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 CACNB2Q08289 660 aaPredicted RBP27.45■■□□□ 1.98
RFFL-206ENST00000447669 CCDC173Q0VFZ6 552 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 ZNF507Q8TCN5 953 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 SEL1LQ9UBV2 794 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 SRRDQ9UH36 339 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 EVPLQ92817 2033 aa27.45■■□□□ 1.98
RFFL-206ENST00000447669 CCDC169A6NNP5 214 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 PPP1R2P41236 205 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 MFSD14CQ5VZR4 134 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 LRRC71Q8N4P6 559 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 SUGCTQ9HAC7 445 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 THSD7BQ9C0I4 1608 aa27.44■■□□□ 1.98
RFFL-206ENST00000447669 NPTX2P47972 431 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 UBASH3AP57075 661 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 DGKDQ16760 1214 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms