RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TBC1D10BQ4KMP7 808 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-203ENST00000445889 ELMO3Q96BJ8 720 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 CCDC113Q9H0I3 377 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 UTP11Q9Y3A2 253 aaKnown RBP15.46■□□□□ 0.07
ERCC3-203ENST00000445889 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 KRT13P13646 458 aa15.46■□□□□ 0.06
ERCC3-203ENST00000445889 GSCP56915 257 aaPredicted RBP15.46■□□□□ 0.06
ERCC3-203ENST00000445889 CCDC38Q502W7 563 aa15.46■□□□□ 0.06
ERCC3-203ENST00000445889 FOXO6A8MYZ6 492 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 EML1O00423 815 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 HGSO14964 777 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 SHMT1P34896 483 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 IFNAR2P48551 515 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 SMTNP53814 917 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 IFI35P80217 286 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ARHGAP4P98171 946 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 GABPAQ06546 454 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ORC2Q13416 577 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 BYSLQ13895 437 aaKnown RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 RUFY4Q6ZNE9 571 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 CPNE8Q86YQ8 564 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 THAP2Q9H0W7 228 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 AMFRQ9UKV5 643 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ASTN1O14525 1302 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 SPATA31A5Q5VU36 1347 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 SPATA31A7Q8IWB4 1347 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 KDM3AQ9Y4C1 1321 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ATXN2Q99700 1313 aaKnown RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 F8VZ95 297 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 CTNND1O60716 968 aaKnown RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 PLCG2P16885 1265 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 MARCKSL1P49006 195 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 DRAP1Q14919 205 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 LRIG3Q6UXM1 1119 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 FAM196AQ6ZSG2 479 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 KIRREL3Q8IZU9 778 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 KCNMB3Q9NPA1 279 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ACP6Q9NPH0 428 aa15.45■□□□□ 0.06
ERCC3-203ENST00000445889 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-203ENST00000445889 MEIS2O14770 477 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 RASSF9O75901 435 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 SEPT2Q15019 361 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 EDRF1Q3B7T1 1238 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 PRR5LQ6MZQ0 368 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 FRMD5Q7Z6J6 570 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 TPH2Q8IWU9 490 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 SPICE1Q8N0Z3 855 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CERS5Q8N5B7 392 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 ALG3Q92685 438 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 C18orf8Q96DM3 657 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 FMO2Q99518 471 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 STXBP5LQ9Y2K9 1186 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CHUKO15111 745 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CACNA2D3Q8IZS8 1091 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 MYCT1Q8N699 235 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 TBC1D16Q8TBP0 767 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 FBXO25Q8TCJ0 367 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 KCNQ5Q9NR82 932 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 DNAJC12Q9UKB3 198 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 DDX60LQ5H9U9 1706 aaKnown RBP15.44■□□□□ 0.06
ERCC3-203ENST00000445889 TGFB1I1O43294 461 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 EEF2P13639 858 aaKnown RBP15.44■□□□□ 0.06
ERCC3-203ENST00000445889 STAT1P42224 750 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 IFI16Q16666 785 aaKnown RBP15.44■□□□□ 0.06
ERCC3-203ENST00000445889 HYIQ5T013 277 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 ATP8B4Q8TF62 1192 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 SH2D3AQ9BRG2 576 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 COG5Q9UP83 839 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 TRAF3IP3Q9Y228 551 aa15.44■□□□□ 0.06
ERCC3-203ENST00000445889 NOVP48745 357 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 DR1Q01658 176 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 CYB5D1Q6P9G0 228 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 VPS36Q86VN1 386 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 KRT35Q92764 455 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 MLXIPLQ9NP71 852 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 CNTNAP4Q9C0A0 1308 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 TISP43B9A030 160 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 ATMINO43313 823 aaPredicted RBP15.43■□□□□ 0.06
ERCC3-203ENST00000445889 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
ERCC3-203ENST00000445889 TBCAO75347 108 aaKnown RBP15.43■□□□□ 0.06
ERCC3-203ENST00000445889 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 CHN1P15882 459 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 FGFR4P22455 802 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 DDR1Q08345 913 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 BIRC3Q13489 604 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 SLC29A2Q14542 456 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 FUKQ8N0W3 1084 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 HES6Q96HZ4 224 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms