RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZC3H15Q8WU90 426 aaKnown RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 CFAP36Q96G28 342 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 SRGAP2BP0DMP2 458 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 ARL4CP56559 192 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 DNAJC24Q6P3W2 148 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 GLG1Q92896 1179 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 TESPA1A2RU30 521 aaPredicted RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 TTLL1O95922 423 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 BYSLQ13895 437 aaKnown RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 RNF207Q6ZRF8 634 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 HACE1Q8IYU2 909 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 DEPDC1BQ8WUY9 529 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 AGGF1Q8N302 714 aaeCLIP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 GIPC2Q8TF65 315 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 DDX47Q9H0S4 455 aaKnown RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 CLIC2O15247 247 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 GINS2Q9Y248 185 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 CDC42BPGQ6DT37 1551 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 LRRC53A6NM62 1247 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 GOLGA8CPA6NN73 597 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 PPEF1O14829 653 aaPredicted RBP19.93■□□□□ 0.78
SHANK3-203ENST00000445220 PSMD7P51665 324 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 KIF22Q14807 665 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 LRRC14Q15048 493 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 DOK7Q18PE1 504 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 KLHL38Q2WGJ6 581 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 AIFM3Q96NN9 605 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 EHD2Q9NZN4 543 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 FIS1Q9Y3D6 152 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 TRPM1Q7Z4N2 1603 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 IRAK1P51617 712 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 HDAC4P56524 1084 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 NCK2O43639 380 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 CHRNA3P32297 505 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 TOB2Q14106 344 aaPredicted RBP19.93■□□□□ 0.78
SHANK3-203ENST00000445220 CRYMQ14894 314 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 HPCAL4Q9UM19 191 aa19.93■□□□□ 0.78
SHANK3-203ENST00000445220 KRT38O76015 456 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 RARS2Q5T160 578 aaKnown RBP19.92■□□□□ 0.78
SHANK3-203ENST00000445220 TMEM154Q6P9G4 183 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 LRIG3Q6UXM1 1119 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 SEC31BQ9NQW1 1179 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 CFAP69A5D8W1 941 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 HSPA9P38646 679 aaKnown RBP19.92■□□□□ 0.78
SHANK3-203ENST00000445220 RASSF3Q86WH2 238 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 ACCSQ96QU6 501 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 SLC5A4Q9NY91 659 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 KCNA4P22459 653 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 DNAAF3Q8N9W5 541 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 PUS7LQ9H0K6 701 aaKnown RBP19.92■□□□□ 0.78
SHANK3-203ENST00000445220 CYP2E1P05181 493 aaPredicted RBP19.92■□□□□ 0.78
SHANK3-203ENST00000445220 KCNA3P22001 575 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 OCRLQ01968 901 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 CATSPER1Q8NEC5 780 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 MMS19Q96T76 1030 aa19.92■□□□□ 0.78
SHANK3-203ENST00000445220 M0QZ92 97 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 TEX33O43247 280 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 S100BP04271 92 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 GFPT1Q06210 699 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 SH2D3CQ8N5H7 860 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 FBXL13Q8NEE6 735 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 SLC26A7Q8TE54 656 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 TBCKQ8TEA7 893 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 KANSL2Q9H9L4 492 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 SLC40A1Q9NP59 571 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 TTC26A0AVF1 554 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 SYCE1LA8MT33 242 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 LSP1P33241 339 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 HP1BP3Q5SSJ5 553 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 CCNI2Q6ZMN8 369 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 KIAA2013Q8IYS2 634 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 LCORLQ8N3X6 602 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 LRRC1Q9BTT6 524 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 TMEM206Q9H813 350 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 THRAP3Q9Y2W1 955 aaKnown RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 CCDC22O60826 627 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 SYF2O95926 243 aaKnown RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 ITKQ08881 620 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 MED21Q13503 144 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 CDC37Q16543 378 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-203ENST00000445220 PPME1Q9Y570 386 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 MXI1P50539 228 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 ERFEQ4G0M1 354 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 CALN1Q9BXU9 219 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 NBPF3Q9H094 633 aa19.91■□□□□ 0.78
SHANK3-203ENST00000445220 RNF103-CHMP3A0A140T963 221 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 TCP10L2B9ZVM9 353 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 AGTP01019 485 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 PSMC1P62191 440 aaKnown RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 EN1Q05925 392 aaPredicted RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 NBPF20Q3BBV1 942 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 KRT39Q6A163 491 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 APLFQ8IW19 511 aaPredicted RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 SEC16BQ96JE7 1060 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 HNRNPDLO14979 420 aaKnown RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 SERPINB2P05120 415 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms