RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CDC25AP30304 524 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 RARRES1P49788 294 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-208ENST00000444533 DEFB128Q7Z7B8 93 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 LRRC71Q8N4P6 559 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 PSPC1Q8WXF1 523 aaKnown RBP15.7■□□□□ 0.1
SSBP3-208ENST00000444533 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 CSRNP2Q9H175 543 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 IL23AQ9NPF7 189 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 FBXO2Q9UK22 296 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-208ENST00000444533 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 TRPV2Q9Y5S1 764 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 ASAP2O43150 1006 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 STBD1O95210 358 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 SSBP05455 408 aaKnown RBP eCLIP15.69■□□□□ 0.1
SSBP3-208ENST00000444533 ITGB8P26012 769 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CLCN3P51790 818 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 EMC2Q15006 297 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CSPP1Q1MSJ5 1256 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 TRIM71Q2Q1W2 868 aaKnown RBP15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CHRDL2Q6WN34 429 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 NLRP7Q8WX94 980 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CELF4Q9BZC1 486 aaKnown RBP15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 WNT8AQ9H1J5 351 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 BHMT2Q9H2M3 363 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 FAM13BQ9NYF5 915 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CHMP5Q9NZZ3 219 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-208ENST00000444533 CDY2AQ9Y6F7 541 aa15.69■□□□□ 0.1
SSBP3-208ENST00000444533 TRIP12Q14669 1992 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 USO1O60763 962 aaKnown RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 EFCAB14O75071 495 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 EYA4O95677 639 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 FGBP02675 491 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 VTNP04004 478 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 BMP8BP34820 402 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 TMEM62Q0P6H9 643 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 TFDP1Q14186 410 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 MXD4Q14582 209 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 FAM26DQ5JW98 314 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 HYIQ5T013 277 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 CCDC73Q6ZRK6 1079 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 SEPT8Q92599 483 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 WNT8BQ93098 351 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 ZBTB10Q96DT7 871 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 CLIC6Q96NY7 704 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 GDF15Q99988 308 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 DHX33Q9H6R0 707 aaKnown RBP15.68■□□□□ 0.1
SSBP3-208ENST00000444533 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 ZDHHC9Q9Y397 364 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
SSBP3-208ENST00000444533 MYH15Q9Y2K3 1946 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 ZBTB39O15060 712 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 CRYBB1P53674 252 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 NLRP11P59045 1033 aaKnown RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 RRAGBQ5VZM2 374 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 FAM43BQ6ZT52 329 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 RHPN2Q8IUC4 686 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 SYMPKQ92797 1274 aaKnown RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 APBB2Q92870 758 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 PLIN2Q99541 437 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 MMTAG2Q9BU76 263 aaKnown RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 TIPINQ9BVW5 301 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 GCOM2Q9BZD3 368 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-208ENST00000444533 RCOR1Q9UKL0 485 aa15.67■□□□□ 0.1
SSBP3-208ENST00000444533 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 ZBBXA8MT70 800 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 GPR182O15218 404 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 CHRNA1P02708 482 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 ACRP10323 421 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 DDIT3P35638 169 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 PAK2Q13177 524 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 IKBKEQ14164 716 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
SSBP3-208ENST00000444533 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 FAM102BQ5T8I3 360 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 CNKSR3Q6P9H4 555 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 TSHZ1Q6ZSZ6 1077 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 ZNF410Q86VK4 478 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 TMEM143Q96AN5 459 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 EPSTI1Q96J88 318 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 IFT74Q96LB3 600 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
SSBP3-208ENST00000444533 NLRP4Q96MN2 994 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 IFIH1Q9BYX4 1025 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms