RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PSRC1Q6PGN9 363 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 DBF4BQ8NFT6 615 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 TUFT1Q9NNX1 390 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 NRBP2Q9NSY0 501 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 VWA3AA6NCI4 1184 aa14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 DEFB103AP81534 67 aa14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 PDIA5Q14554 519 aa14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 HYIQ5T013 277 aa14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
PDLIM2-212ENST00000443561 MYH11P35749 1972 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 MAGEB2O15479 319 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 MGEA5O60502 916 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 ARHGEF15O94989 841 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 FGBP02675 491 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 MARCKSP29966 332 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 GPC3P51654 580 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 TBC1D8BQ0IIM8 1120 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 KIZQ2M2Z5 673 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 TMEM119Q4V9L6 283 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 KSR1Q8IVT5 923 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 SNX29Q8TEQ0 813 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 CEP170P1Q96L14 293 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 OSMRQ99650 979 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 CELF4Q9BZC1 486 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 ANKEF1Q9NU02 776 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 MORC2Q9Y6X9 1032 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 CHD7Q9P2D1 2997 aa14.36□□□□□ -0.11
PDLIM2-212ENST00000443561 ATG2AQ2TAZ0 1938 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 E9PMD0 336 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 PFKMP08237 780 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 CD52P31358 61 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 CCT6AP40227 531 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 PBX2P40425 430 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 EMC2Q15006 297 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 TMEM266Q2M3C6 531 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 XKR9Q5GH70 373 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 DTHD1Q6ZMT9 781 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 FAM228AQ86W67 206 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 LINC00301Q8NCQ3 95 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 CLIC6Q96NY7 704 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 SUGCTQ9HAC7 445 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 ERVK-5Q9HDB9 667 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 GPRC5CQ9NQ84 441 aa14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 DDX19AQ9NUU7 478 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-212ENST00000443561 NLRC5Q86WI3 1866 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 A0A087X0B3 334 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 CSDE1O75534 798 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 HSP90AA1P07900 732 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 NLRP11P59045 1033 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 SPECC1Q5M775 1068 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 TSHZ1Q6ZSZ6 1077 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 SPRED2Q7Z698 418 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 RPUSD2Q8IZ73 545 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 CRIPAKQ8N1N5 446 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 NME8Q8N427 588 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 BSNDQ8WZ55 320 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 IFIH1Q9BYX4 1025 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 CSRNP2Q9H175 543 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-212ENST00000443561 USO1O60763 962 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 DKC1O60832 514 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 MUTP22033 750 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 FGFR4P22455 802 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 RFC5P40937 340 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 RABGGTBP53611 331 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 MAPK7Q13164 816 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 DSC3Q14574 896 aa14.33□□□□□ -0.12
PDLIM2-212ENST00000443561 DAW1Q8N136 415 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms