RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNX17-203ENST00000440760 NR1I3Q14994 352 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 FAM160B1Q5W0V3 765 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 ZNF784Q8NCA9 323 aaPredicted RBP21.06■□□□□ 0.96
SNX17-203ENST00000440760 KCNF1Q9H3M0 494 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 MAGEC2Q9UBF1 373 aaPredicted RBP21.06■□□□□ 0.96
SNX17-203ENST00000440760 CENPFP49454 3210 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 TNPO2O14787 897 aaKnown RBP21.06■□□□□ 0.96
SNX17-203ENST00000440760 ADCY6O43306 1168 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 KIF20AO95235 890 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 CYP2B6P20813 491 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 KNOP1Q1ED39 458 aaKnown RBP21.06■□□□□ 0.96
SNX17-203ENST00000440760 BMT2Q1RMZ1 405 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 PRAMEF19Q5SWL8 479 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 ZNF720Q7Z2F6 126 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 ZNF507Q8TCN5 953 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 AFAP1L1Q8TED9 768 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 GLG1Q92896 1179 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 ARHGAP39Q9C0H5 1083 aa21.06■□□□□ 0.96
SNX17-203ENST00000440760 RBM47A0AV96 593 aaKnown RBP21.05■□□□□ 0.96
SNX17-203ENST00000440760 TPM3P06753 285 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 PLS3P13797 630 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 EEF1GP26641 437 aaKnown RBP21.05■□□□□ 0.96
SNX17-203ENST00000440760 PEX3P56589 373 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 NOGQ13253 232 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 ACVR2BQ13705 512 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 ANKRD20A12PQ8NF67 263 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 BSNDQ8WZ55 320 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 DRC1Q96MC2 740 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 CTAGE1Q96RT6 745 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 KIFC3Q9BVG8 833 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 RTN4Q9NQC3 1192 aaKnown RBP21.05■□□□□ 0.96
SNX17-203ENST00000440760 SLC5A4Q9NY91 659 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 LARSQ9P2J5 1176 aaKnown RBP21.05■□□□□ 0.96
SNX17-203ENST00000440760 N4BP3O15049 544 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 EIF3DO15371 548 aaKnown RBP eCLIP21.05■□□□□ 0.965e-6■□□□□ 8.9
SNX17-203ENST00000440760 DEFB115Q30KQ5 88 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 HS1BP3Q53T59 392 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 USP6NLQ92738 828 aa21.05■□□□□ 0.96
SNX17-203ENST00000440760 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.05■□□□□ 0.96
SNX17-203ENST00000440760 RASSF10A6NK89 507 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 LGR5O75473 907 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 DGAT1O75907 488 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 GH1P01241 217 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 SMPD1P17405 629 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 CYP2C19P33261 490 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 POLGP54098 1239 aaPredicted RBP21.04■□□□□ 0.96
SNX17-203ENST00000440760 LRMPQ12912 555 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 EMC2Q15006 297 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 TIPINQ9BVW5 301 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 ABHD16BQ9H3Z7 469 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
SNX17-203ENST00000440760 EMSYQ7Z589 1322 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 PES1O00541 588 aaKnown RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 PPP1R37O75864 691 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 PRKCSHP14314 528 aaPredicted RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 YY1P25490 414 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 MTIF2P46199 727 aaKnown RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 GOLGA8FQ08AF8 430 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 GOLGA8DPQ0D2H9 430 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 FILIP1LQ4L180 1135 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 FAM114A1Q8IWE2 563 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 AFG1LQ8WV93 481 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 TUBGCP2Q9BSJ2 902 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 PDLIM7Q9NR12 457 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 CREBZFQ9NS37 354 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 GJD2Q9UKL4 321 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 LRRC10BA6NIK2 292 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 SLC16A4O15374 487 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 TGFB1I1O43294 461 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 HOXC6P09630 235 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 FKBP3Q00688 224 aaKnown RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
SNX17-203ENST00000440760 POLR3FQ9H1D9 316 aaPredicted RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 TYW1Q9NV66 732 aaKnown RBP21.03■□□□□ 0.96
SNX17-203ENST00000440760 CLIC2O15247 247 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 NR2F2P24468 414 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 RGS2P41220 211 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 FOXR2Q6PJQ5 311 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 CACTINQ8WUQ7 758 aaKnown RBP21.02■□□□□ 0.96
SNX17-203ENST00000440760 TMEM143Q96AN5 459 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 APBA2Q99767 749 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 STRA6Q9BX79 667 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 NIFKQ9BYG3 293 aaKnown RBP21.02■□□□□ 0.96
SNX17-203ENST00000440760 TRAF3IP3Q9Y228 551 aa21.02■□□□□ 0.96
SNX17-203ENST00000440760 ZNF286BP0CG31 522 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 PBX1P40424 430 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 APLP1P51693 650 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 HTRA3P83110 453 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 LAMC2Q13753 1193 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 PLCB4Q15147 1175 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 MCPH1Q8NEM0 835 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 SOCS4Q8WXH5 440 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 UBE4BO95155 1302 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 ADGRA3Q8IWK6 1321 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 CCDC169A6NNP5 214 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 LGALS16A8MUM7 142 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms