RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 ADAM2Q99965 735 aa13.47□□□□□ -0.25
PDGFB-203ENST00000440375 SH2D3AQ9BRG2 576 aa13.47□□□□□ -0.25
PDGFB-203ENST00000440375 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
PDGFB-203ENST00000440375 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
PDGFB-203ENST00000440375 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
PDGFB-203ENST00000440375 EVPLQ92817 2033 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 FAM205CA6NFA0 338 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 CDKL5O76039 1030 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 STBD1O95210 358 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 SEC24BO95487 1268 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 SFNP31947 248 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 DRP2Q13474 957 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 ME3Q16798 604 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 GALNT17Q6IS24 598 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 EFCAB12Q6NXP0 572 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 ALG13Q9NP73 1137 aaKnown RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.25
PDGFB-203ENST00000440375 CEP131Q9UPN4 1083 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
PDGFB-203ENST00000440375 MYO7AQ13402 2215 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 C9IYK1 514 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 EML1O00423 815 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 MAGEB2O15479 319 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 RB1P06400 928 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 STAG3L1P0CL83 205 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 DNAJB1P25685 340 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 CAMK1Q14012 370 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 DSC3Q14574 896 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 ORC3Q9UBD5 711 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-203ENST00000440375 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 RWDD3Q9Y3V2 267 aa13.45□□□□□ -0.26
PDGFB-203ENST00000440375 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 GPR182O15218 404 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 MMP1P03956 469 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 ITGB1P05556 798 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 FGFR1P11362 822 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 FGFR4P22455 802 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDGFB-203ENST00000440375 GPC3P51654 580 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 FOSBP53539 338 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 ST3GAL1Q11201 340 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 NR5A1Q13285 461 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 COL19A1Q14993 1142 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 MTERF2Q49AM1 385 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 RDM1Q8NG50 284 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 KCNMB3Q9NPA1 279 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 NRBP2Q9NSY0 501 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 PLAGL2Q9UPG8 496 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
PDGFB-203ENST00000440375 C5orf42Q9H799 3197 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 JAK2O60674 1132 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 CSDE1O75534 798 aaKnown RBP13.43□□□□□ -0.26
PDGFB-203ENST00000440375 IL9P15248 144 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 IRS1P35568 1242 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 HYAL1Q12794 435 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 PLA2G4FQ68DD2 849 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
PDGFB-203ENST00000440375 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 HAS1Q92839 578 aa13.43□□□□□ -0.26
PDGFB-203ENST00000440375 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDGFB-203ENST00000440375 TNFRSF25Q93038 417 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms