RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MKRN4PQ13434 485 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 DRP2Q13474 957 aa21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 FOXD4L6Q3SYB3 417 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 FOXD4L3Q6VB84 417 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 HERVK_113Q902F9 699 aa21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 CELF4Q9BZC1 486 aaKnown RBP21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 BMP2KQ9NSY1 1161 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 ANKEF1Q9NU02 776 aa21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 AKT3Q9Y243 479 aa21.75■■□□□ 1.07
SEMA3B-206ENST00000439487 IGKV6-21A0A0C4DH24 114 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 GHRP10912 638 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 ACTN1P12814 892 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 MARCKSP29966 332 aaPredicted RBP21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 GRIN1Q05586 938 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 KRT79Q5XKE5 535 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 CNKSR3Q6P9H4 555 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 NACC1Q96RE7 527 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 MAP7D2Q96T17 732 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 MMTAG2Q9BU76 263 aaKnown RBP21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 CDHR5Q9HBB8 845 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 CXXC1Q9P0U4 656 aaPredicted RBP21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 GINS2Q9Y248 185 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 STK24Q9Y6E0 443 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 LAMA3Q16787 3333 aa21.74■■□□□ 1.07
SEMA3B-206ENST00000439487 ZBBXA8MT70 800 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 XRCC6P12956 609 aaKnown RBP eCLIP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 RFC5P40937 340 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 RARRES1P49788 294 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 POLGP54098 1239 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 LPIN1Q14693 890 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 PLEKHG4Q58EX7 1191 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 FBXO47Q5MNV8 452 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 RASIP1Q5U651 963 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 DBF4BQ8NFT6 615 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 ZNF668Q96K58 619 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 DHX33Q9H6R0 707 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 TFIP11Q9UBB9 837 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 DAXXQ9UER7 740 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 KIAA1024Q9UPX6 916 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 PPME1Q9Y570 386 aa21.73■■□□□ 1.07
SEMA3B-206ENST00000439487 MYH11P35749 1972 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 MUTP22033 750 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 ZRSR1Q15695 479 aaKnown RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 KIZQ2M2Z5 673 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 SLC7A3Q8WY07 619 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 SEPT8Q92599 483 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 CCDC43Q96MW1 224 aaKnown RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 ZNF396Q96N95 335 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 JPH2Q9BR39 696 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 DDX19AQ9NUU7 478 aaKnown RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 SUCLA2Q9P2R7 463 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 KDM3AQ9Y4C1 1321 aa21.72■■□□□ 1.07
SEMA3B-206ENST00000439487 MYO9BQ13459 2157 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 GPR32O75388 356 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 BRD1O95696 1058 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 DNM2P50570 870 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 NLRP11P59045 1033 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 EMC2Q15006 297 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 SLC39A14Q15043 492 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 EXOC8Q8IYI6 725 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 TMEM143Q96AN5 459 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 OSMRQ99650 979 aa21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 MTIF3Q9H2K0 278 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 AGO3Q9H9G7 860 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 DBR1Q9UK59 544 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-206ENST00000439487 NASPP49321 788 aaPredicted RBP21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 CRYBB1P53674 252 aaPredicted RBP21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 STK38Q15208 465 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 LRIT3Q3SXY7 679 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 TSHZ1Q6ZSZ6 1077 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 PNMA5Q96PV4 448 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 PLIN2Q99541 437 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 MTRQ99707 1265 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 IFIH1Q9BYX4 1025 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 ADAMTS10Q9H324 1103 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 XPNPEP1Q9NQW7 623 aa21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 FBXO2Q9UK22 296 aaPredicted RBP21.7■■□□□ 1.06
SEMA3B-206ENST00000439487 E9PMD0 336 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 SOX1O00570 391 aaPredicted RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 USO1O60763 962 aaKnown RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 BAIAP3O94812 1187 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 CD52P31358 61 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 LONP1P36776 959 aaKnown RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 GPC3P51654 580 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 IKBKEQ14164 716 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 FAM109BQ6ICB4 259 aaPredicted RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 CABP7Q86V35 215 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 RHPN2Q8IUC4 686 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 TMEM40Q8WWA1 233 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 AK8Q96MA6 479 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 CLIC6Q96NY7 704 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 CSRNP2Q9H175 543 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 ATP6V0A4Q9HBG4 840 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 NOC2LQ9Y3T9 749 aaKnown RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 SRPRBQ9Y5M8 271 aaKnown RBP21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 SLC4A7Q9Y6M7 1214 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 SQORQ9Y6N5 450 aa21.69■■□□□ 1.06
SEMA3B-206ENST00000439487 ARHGEF35A5YM69 484 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 GRXCR1A8MXD5 290 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms