RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 RUBCNQ92622 972 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 VPS37BQ9H9H4 285 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 POLD4Q9HCU8 107 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 SERPINA10Q9UK55 444 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 UNCXA6NJT0 531 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 CCDC188H7C350 402 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 MEFVO15553 781 aaPredicted RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 NDUFB5O43674 189 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ACTN3Q08043 901 aaPredicted RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 CUL1Q13616 776 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 MUM1Q2TAK8 710 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ARHGEF18Q6ZSZ5 1173 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 NLRP14Q86W24 1093 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 FBXL16Q8N461 479 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 BHMTQ93088 406 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 PHF20Q9BVI0 1012 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 AS3MTQ9HBK9 375 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 DAAM1Q9Y4D1 1078 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 NOP56O00567 594 aaKnown RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 SRGNP10124 158 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ATF2P15336 505 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 NR2F2P24468 414 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TRPC1P48995 793 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TUFMP49411 452 aaKnown RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ZCCHC8Q6NZY4 707 aaKnown RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 LLGL2Q6P1M3 1020 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TRAPPC11Q7Z392 1133 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TMEM98Q9Y2Y6 226 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 GMNCA6NCL1 334 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 MAP2K7O14733 419 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 NMT2O60551 498 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 PPP1R37O75864 691 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 TFRCP02786 760 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 KPNA2P52292 529 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 PLTPP55058 493 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 CAPRIN2Q6IMN6 1127 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 CCDC24Q8N4L8 307 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 FBXO41Q8TF61 875 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 ATP6V1G3Q96LB4 118 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 MXD3Q9BW11 206 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 BRIP1Q9BX63 1249 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 OSBPL10Q9BXB5 764 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 PSTPIP2Q9H939 334 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 KIAA1024Q9UPX6 916 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 ADAMTS13Q76LX8 1427 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 ANKRD26Q9UPS8 1709 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 TRIM64CA6NLI5 447 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 IL6STP40189 918 aaPredicted RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 MFAP3P55082 362 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 NSUN2Q08J23 767 aaKnown RBP eCLIP6.84□□□□□ -1.31
BDNF-211ENST00000439476 ANKRD40Q6AI12 368 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CLEC4GQ6UXB4 293 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 MIER3Q7Z3K6 550 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 FAM178BQ8IXR5 827 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CCDC13Q8IYE1 715 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 LRRC8CQ8TDW0 803 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 EPAS1Q99814 870 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 WDR11Q9BZH6 1224 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 DRC3Q9H069 523 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 FAM96AQ9H5X1 160 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 EPB41L4AQ9HCS5 686 aaPredicted RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 DDX25Q9UHL0 483 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 BOLA2-SMG1P6H3BVE0 249 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CHMP2AO43633 222 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 RNF8O76064 485 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 TNNC2P02585 160 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 USP17L8P0C7I0 530 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CD19P15391 556 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 ADCY8P40145 1251 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CACNB1Q02641 598 aaPredicted RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 TXNRD1Q16881 649 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 RINT1Q6NUQ1 792 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 DEPTORQ8TB45 409 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 PRPF31Q8WWY3 499 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 RNF34Q969K3 372 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 RILPQ96NA2 401 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 SH3GLB2Q9NR46 395 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 TXLNGQ9NUQ3 528 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.31
BDNF-211ENST00000439476 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
BDNF-211ENST00000439476 LRRD1A4D1F6 860 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 EIF3FO00303 357 aaPredicted RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 GNPATO15228 680 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 XPOTO43592 962 aaKnown RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 KRT14P02533 472 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 KRT3P12035 628 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 PTK2Q05397 1052 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 NTRK3Q16288 839 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 ALKBH5Q6P6C2 394 aaKnown RBP6.84□□□□□ -1.32
BDNF-211ENST00000439476 UNC13DQ70J99 1090 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 LCA5Q86VQ0 697 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 RDH13Q8NBN7 331 aa6.84□□□□□ -1.32
BDNF-211ENST00000439476 MAGOHBQ96A72 148 aaKnown RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms