RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 STILQ15468 1287 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 LARP4Q71RC2 724 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 OTOP2Q7RTS6 562 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZC3H7AQ8IWR0 971 aaKnown RBP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 EXTL1Q92935 676 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZNF503Q96F45 646 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 OR14A2Q96R54 314 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 DHRS4Q9BTZ2 278 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 PLA2G12BQ9BX93 195 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 KIAA1683Q9H0B3 1180 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 SLITRK6Q9H5Y7 841 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 PUF60Q9UHX1 559 aaKnown RBP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 EPRSP07814 1512 aaKnown RBP4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 CPS1P31327 1500 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 RPS19P39019 145 aaKnown RBP4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 ECE1P42892 770 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 ZC3H6P61129 1189 aaKnown RBP4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 CD83Q01151 205 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 PCOLCEQ15113 449 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 SEC23AQ15436 765 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 LONRF2Q1L5Z9 754 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 NBPF6Q5VWK0 638 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 MAMDC4Q6UXC1 1216 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 USP30Q70CQ3 517 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 WDR48Q8TAF3 677 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 CFHR4Q92496 578 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 FAM89AQ96GI7 184 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 SNX27Q96L92 541 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 NBPF4Q96M43 638 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 AMNQ9BXJ7 453 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 CSRNP2Q9H175 543 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 UCKL1Q9NWZ5 548 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 SIRPGQ9P1W8 387 aa4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 MRPS23Q9Y3D9 190 aaKnown RBP4.52□□□□□ -1.69
HMGB1P18-201ENST00000438801 KDM2BQ8NHM5 1336 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 BCL9LQ86UU0 1499 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 A0A0G2JNJ9 132 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 OVOL3O00110 214 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 PLSCR1O15162 318 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 MMEP08473 750 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 ATP2B1P20020 1258 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 PTH1RQ03431 593 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 FHL2Q14192 279 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 NAALADL2Q58DX5 795 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 TMEM200BQ69YZ2 307 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 TRIM68Q6AZZ1 485 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 LRSAM1Q6UWE0 723 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 CISD2Q8N5K1 135 aaKnown RBP4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 OR10A5Q9H207 317 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 MSL2Q9HCI7 577 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 Q9UFV3 132 aa4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 TDRD9Q8NDG6 1382 aaKnown RBP4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 SETD1BQ9UPS6 1966 aaKnown RBP4.51□□□□□ -1.69
HMGB1P18-201ENST00000438801 USP19O94966 1318 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 SCDO00767 359 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 APPP05067 770 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 MRE11P49959 708 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 MEOX1P50221 254 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 FOXL1Q12952 345 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 LSM12Q3MHD2 195 aaKnown RBP4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 CRB2Q5IJ48 1285 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 KANK2Q63ZY3 851 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 IGFL4Q6B9Z1 124 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 GRAMD4Q6IC98 578 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 FILIP1Q7Z7B0 1213 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 NOSTRINQ8IVI9 506 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 C1orf210Q8IVY1 113 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 RTKN2Q8IZC4 609 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 ZNF808Q8N4W9 903 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 ASB15Q8WXK1 588 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 TANGO6Q9C0B7 1094 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 OR10A2Q9H208 303 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 SLC52A2Q9HAB3 445 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 NDOR1Q9UHB4 597 aa4.5□□□□□ -1.69
HMGB1P18-201ENST00000438801 POGZQ7Z3K3 1410 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 PRG4Q92954 1404 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 FOXP2O15409 715 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 EFCAB14O75071 495 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 ZNF202O95125 648 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 ACRV1P26436 265 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 MSX2P35548 267 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 TGFB2P61812 414 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 DGCR2P98153 550 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 ABHD18Q0P651 414 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 MOGSQ13724 837 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 TM4SF20Q53R12 229 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 ZC3H12BQ5HYM0 836 aaKnown RBP4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 HIPK4Q8NE63 616 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 GBP4Q96PP9 640 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 PLEKHG4BQ96PX9 1271 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 NELFAQ9H3P2 528 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 KCNH7Q9NS40 1196 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 FAM184BQ9ULE4 1060 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 COQ6Q9Y2Z9 468 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms