RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CALML3P27482 149 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 RPS6P62753 249 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 GDF6Q6KF10 455 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 TMCO2Q7Z6W1 182 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 CLEC4DQ8WXI8 215 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 COPS5Q92905 334 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 TNFRSF25Q93038 417 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 SNX27Q96L92 541 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 CEP63Q96MT8 703 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 IL17RBQ9NRM6 502 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 GTF2IRD1Q9UHL9 959 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 STARD13Q9Y3M8 1113 aa9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-208ENST00000436412 EMSYQ7Z589 1322 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 WDR19Q8NEZ3 1342 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 M0R2C6 588 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 PIK3R2O00459 728 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 MMP3P08254 477 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 CHMP4BP1P59074 171 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 HTRA4P83105 476 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 ZP2Q05996 745 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 SPEM2Q0P670 501 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 COL9A3Q14050 684 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 COL19A1Q14993 1142 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 DGKDQ16760 1214 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 SLC30A10Q6XR72 485 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 AFG1LQ8WV93 481 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 DHX38Q92620 1227 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 KAT2BQ92831 832 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 PABPC5Q96DU9 382 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
NIF3L1-208ENST00000436412 EP300Q09472 2414 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 H3BNC9 293 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ORC4O43929 436 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 NMT2O60551 498 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ADAM23O75077 832 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ARIH2O95376 493 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 AMHP03971 560 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 TOP1P11387 765 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 SLC16A2P36021 539 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 TTBK2Q6IQ55 1244 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 RAB44Q7Z6P3 723 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ANKMY2Q8IV38 441 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ADHFE1Q8IWW8 467 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 PPP1R13LQ8WUF5 828 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 POP1Q99575 1024 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 ANAPC4Q9UJX5 808 aa9.84□□□□□ -0.83
NIF3L1-208ENST00000436412 TPRP12270 2363 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 H3BQ06 376 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 FGRP09769 529 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 ARHGAP1Q07960 439 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 PKN1Q16512 942 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 TRIM71Q2Q1W2 868 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 EPC2Q52LR7 807 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 ZMYM1Q5SVZ6 1142 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF618Q5T7W0 954 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 HFE2Q6ZVN8 426 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 RASGRP2Q7LDG7 609 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 BTLAQ7Z6A9 289 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 NSUN6Q8TEA1 469 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 IWS1Q96ST2 819 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 PRRX2Q99811 253 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 C17orf80Q9BSJ5 609 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 NSUN3Q9H649 340 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 TCP11L1Q9NUJ3 509 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 HDAC6Q9UBN7 1215 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 MTMR7Q9Y216 660 aa9.83□□□□□ -0.84
NIF3L1-208ENST00000436412 C1QTNF9BB2RNN3 333 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 CHRNA4P43681 627 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 GPM6BQ13491 265 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 MBTPS1Q14703 1052 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 STXBP2Q15833 593 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 LY6KQ17RY6 165 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 KIAA0753Q2KHM9 967 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 TCTN1Q2MV58 587 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 HERC4Q5GLZ8 1057 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 SEPT14Q6ZU15 432 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 MYOCDQ8IZQ8 938 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 PPTC7Q8NI37 304 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 TTC14Q96N46 770 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 HINFPQ9BQA5 517 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 TMEM47Q9BQJ4 181 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 NOP53Q9NZM5 478 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 EPG5Q9HCE0 2579 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF292O60281 2723 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
NIF3L1-208ENST00000436412 RSPH10B2B2RC85 870 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 HAS3O00219 553 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms