RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
CD44-209ENST00000433892 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
CD44-209ENST00000433892 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
CD44-209ENST00000433892 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
CD44-209ENST00000433892 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
CD44-209ENST00000433892 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
CD44-209ENST00000433892 EVI5O60447 810 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 GAP43P17677 238 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 SLC20A2Q08357 652 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 BTNL9Q6UXG8 535 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 C1orf186Q6ZWK4 172 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 DDX42Q86XP3 938 aaKnown RBP eCLIP12.87□□□□□ -0.35
CD44-209ENST00000433892 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 NOC2LQ9Y3T9 749 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 GTPBP10A4D1E9 387 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 PGRMC1O00264 195 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 ZBTB48P10074 688 aaPredicted RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 SKOR1P84550 965 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 DDX47Q9H0S4 455 aaKnown RBP12.87□□□□□ -0.35
CD44-209ENST00000433892 ISCUQ9H1K1 167 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
CD44-209ENST00000433892 KRIT1O00522 736 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 EIF3DO15371 548 aaKnown RBP eCLIP12.86□□□□□ -0.35
CD44-209ENST00000433892 PPP1R12BO60237 982 aaPredicted RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 PSMD10O75832 226 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 ITGA4P13612 1032 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 FERP16591 822 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 STAT1P42224 750 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 MAGEA9P43362 315 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 CYP2J2P51589 502 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 STAT2P52630 851 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 GALCP54803 685 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 LNX1Q8TBB1 728 aaPredicted RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
CD44-209ENST00000433892 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 OSGEPQ9NPF4 335 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 WRAP73Q9P2S5 460 aaPredicted RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 F8VZ95 297 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 ZEB2O60315 1214 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 ANXA13P27216 316 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 ECHS1P30084 290 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 FMO5P49326 533 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
CD44-209ENST00000433892 PLAAQ9Y263 795 aa12.86□□□□□ -0.35
CD44-209ENST00000433892 EBAG9O00559 213 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 GAS7O60861 476 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 SOX5P35711 763 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 AOC3Q16853 763 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 NT5DC3Q86UY8 548 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 FAM178BQ8IXR5 827 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 CALR3Q96L12 384 aaKnown RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 SUCLA2Q9P2R7 463 aaPredicted RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 DNAJC12Q9UKB3 198 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 STXBP5LQ9Y2K9 1186 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 SAMM50Q9Y512 469 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 ABCB4P21439 1286 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
CD44-209ENST00000433892 GUCY1A3Q02108 690 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 ODR4Q5SWX8 454 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 CD302Q8IX05 232 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 RDH13Q8NBN7 331 aa12.85□□□□□ -0.35
CD44-209ENST00000433892 SLC30A5Q8TAD4 765 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms